| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0938 |
|---|
| Symbol | |
|---|
| ID | 4016883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 1071829 |
|---|
| End bp | 1072302 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637954928 |
|---|
| Product | blue (type1) copper domain-containing protein |
|---|
| Protein accession | YP_561949 |
|---|
| Protein GI | 91792298 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3241] Azurin |
|---|
| TIGRFAM ID | [TIGR02695] azurin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000352291 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA ACACATCAGC AAGTGCTCGC CTATTACAAG TTATCACCTT AGCCGGTGCA
GCTTTCTTCG CAACATCTGC AAGCGCTAAT GAGTGTGAGC TTAAAGTCGG TGCTAACGAT
GCTATGCAGT TCGACACTAA AGAATTAAGC GTGCCAGCAA GCTGTAAAGA AGTCACAGTA
ACTTTGACTC ACACAGGTGC ATTACCAAAA GCGGCTATGG GCCACAACTG GGTATTAACC
AAAGCTGCTG ACATGGCTGG TGTTGCTACT GACGGTATGC CAGCTGGCGC TGACAATGCA
TTCTTAAAAG CCGGTGACAC TCGCGTTATC GCTCATACTG CTCTTGTAGG CGGCGGCGAA
ACTGTTAGCG TTAAATTCAG CACTGCTGGT TTAACTGCAA CTGACAGCTA CAACTTCTTC
TGCTCATTCC CAGGTCACTG GGCAATCATG CAGGGTACCT TCAGCATCAA ATAA
|
|---|
| Protein sequence | MKINTSASAR LLQVITLAGA AFFATSASAN ECELKVGAND AMQFDTKELS VPASCKEVTV
TLTHTGALPK AAMGHNWVLT KAADMAGVAT DGMPAGADNA FLKAGDTRVI AHTALVGGGE
TVSVKFSTAG LTATDSYNFF CSFPGHWAIM QGTFSIK
|
|---|
| |