| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0930 |
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| Symbol | pntB |
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| ID | 4016836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1060449 |
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| End bp | 1061933 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954920 |
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| Product | pyridine nucleotide transhydrogenase |
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| Protein accession | YP_561941 |
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| Protein GI | 91792290 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.339922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCTCAAG GATTAGTAAG CGCATCGTAC ATCATCGCCG CCGTGTTTTT TATTTTAAGC
CTGGCGGGCT TATCGAAACA AGAAACCGCC AAACGAGGTA ATTGGTTTGG CATTATAGGT
ATGGCGGTTG CTCTTGGCGC CACCATTTTA AACCCAAGCA CCACAGGGGT GGCTTGGATT
ATTCTAGCTA TGGTCATAGG CGCTGCCATA GGTATTCGCT TAGCCCTAAA AGTTGAAATG
ACCCAGATGC CAGAGCTTGT GGCCATTTTA CACAGCTTCG TCGGCCTTGC CGCCGTGCTG
GTGGGCTTTA ACAGCTTTAT CGACCTTCAT CCACAGGCTG TGAATGAAAT CGTACTGGTA
TTGGGGGAGG ATTTATCCAC GACTTTAGAG AGCGCCAAAG CAGCCTTTAT GGAAGTCAGT
ACTCAAGATA AAGGGCTGCA CTTAGAAGGT GCCATGCTCA ATATCCATTT GGTGGAAGTG
TTTTTAGGCA TCTTCATTGG CGCTGTGACC TTTACTGGCT CCATCGTCGC CTTTGGCAAG
CTTAATGGCA GGTTGTCCTC TAAAGCCTTG GCGTTGCCCC ACAGACATAA GCTTAACTTG
CTGGCGGTAC TGGTCTCTAT TGGCTTAATG CTCATGTTTG TACAAGCAGG CGGTGCATTA
ATTCCGCTTA TCATAATGAC CTTAATTGCA CTCGCCTTTG GCTGGCATTT AGTGGCCAGC
ATAGGCGGCG CAGACATGCC AGTAGTGGTG TCGATGCTCA ACTCCTATTC GGGTTGGGCG
GCAGCGGCGG CAGGTTTTAT GCTATCAAAC GACTTGCTGA TTGTTGTGGG TGCACTCGTA
GGCTCATCCG GCGCGATTTT ATCTTACATC ATGTGTAAGG CGATGAACCG CTCGTTTATT
TCAGTGATAG CTGGCGGCTT TGGCAGTGAT GGCGTTGCCA GTACGGCAAG CGATGAAATG
GGCGAATACC GCGAAACTAA CGCCGAAGAT GTGGCTGATT TGCTCAAACA CGCAGATTCT
GTGGTTATTA CCCCAGGCTA TGGCATGGCG GTCGCACAGG CTCAGTATCC GGTGGCTGAA
ATTACCCGCA AGCTTCGCGC CATGGGTATC AAGGTGCGCT TTGGCATCCA CCCTGTTGCT
GGGCGTCTGC CTGGCCACAT GAACGTGCTG TTGGCTGAGG CCAAAGTGCC CTATGACATA
GTGCTGGAGA TGGATGAAAT CAACGAAGAT TTCAGTGACA CAGACGTGGT GCTTGTTATC
GGCGCTAACG ACACTGTGAA TCCTGCCGCC ATGGAAGACC CTGGGAGTCC GATTGCTGGC
ATGCCAGTAT TAGAAGTCTG GAAAGCCCAA ACCGTGATCG GCTTTAAGCG CTCCATGAAC
ACAGGTTATG CCGGCGTGCA AAACCCTTTG TTCTTTAAAG ACAACACCCA AATGCTATTT
GGCGATGCTA AAGAGTCAGT TAATCAAATC TTGGCACATC TTTAA
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| Protein sequence | MSQGLVSASY IIAAVFFILS LAGLSKQETA KRGNWFGIIG MAVALGATIL NPSTTGVAWI
ILAMVIGAAI GIRLALKVEM TQMPELVAIL HSFVGLAAVL VGFNSFIDLH PQAVNEIVLV
LGEDLSTTLE SAKAAFMEVS TQDKGLHLEG AMLNIHLVEV FLGIFIGAVT FTGSIVAFGK
LNGRLSSKAL ALPHRHKLNL LAVLVSIGLM LMFVQAGGAL IPLIIMTLIA LAFGWHLVAS
IGGADMPVVV SMLNSYSGWA AAAAGFMLSN DLLIVVGALV GSSGAILSYI MCKAMNRSFI
SVIAGGFGSD GVASTASDEM GEYRETNAED VADLLKHADS VVITPGYGMA VAQAQYPVAE
ITRKLRAMGI KVRFGIHPVA GRLPGHMNVL LAEAKVPYDI VLEMDEINED FSDTDVVLVI
GANDTVNPAA MEDPGSPIAG MPVLEVWKAQ TVIGFKRSMN TGYAGVQNPL FFKDNTQMLF
GDAKESVNQI LAHL
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