Gene Sden_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0928 
Symbol 
ID4016834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp1057570 
End bp1058280 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content42% 
IMG OID637954918 
Producthypothetical protein 
Protein accessionYP_561939 
Protein GI91792288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00224597 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTC AGAAGCAAGG AGGTTTTGTG TCCAAGTTAA GTGTGTTGTT ACTCTGTTTG 
CTTAGTGCAG TGGTCATTGT CTTTGGTGTC ACTCAGCGTC ATGCCTTGGC TTGTGAACTC 
ATTGAATATG CTAAACATGC CGAATATTCA GAAATAGCGC CGAATGTGTT CGCTAGCAAC 
GCTTTTAGTA GTGAGCAAAA CGAAAAGCTA CTTACAGTGA TTGAGCTGGG GAAACGTCGA 
GTTAACCAGA CGTTTGGCAA TATGATTGCT AACCCTAAAG TGGTTATTGC AGCAAATGAC 
ATTGAAGCCG CTGATTTTGG CGCTAACCCC TTTGGCAAAG CCTTGCTGAC GCCTCTGGGC 
CAATGCCTTA TTTTGGGTCC CAAAGGGCAG AATATTGATG TGATTGCCCA CGAATATACC 
CATGCTGAAG TCCACCATAG AGTGGGTTGG TTAAATCACC TGTTAAATGT GCCGATTTGG 
TTTAATGAAG GAGTCGCGCT GTTAGTTGAT TTCAGGGAGC CTTATCTTTT AGAAAATATC 
CAACTGTCTG TTGATCAAAT CAATACTGTT AAGAGCAATC CATTCGAATT TTCCATTGCC 
AGCTATAAAG CTGCCAGAGT GCTAGTGGAG CCGGTCGATA AAGCCACTCT CTATGAAAAT 
TTAGAAAAAC TAAAACAAGG ACAAGACATC AAGAGTGTCT TTGCATTGTA A
 
Protein sequence
MIFQKQGGFV SKLSVLLLCL LSAVVIVFGV TQRHALACEL IEYAKHAEYS EIAPNVFASN 
AFSSEQNEKL LTVIELGKRR VNQTFGNMIA NPKVVIAAND IEAADFGANP FGKALLTPLG 
QCLILGPKGQ NIDVIAHEYT HAEVHHRVGW LNHLLNVPIW FNEGVALLVD FREPYLLENI 
QLSVDQINTV KSNPFEFSIA SYKAARVLVE PVDKATLYEN LEKLKQGQDI KSVFAL