| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0921 |
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| Symbol | |
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| ID | 4016827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1051623 |
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| End bp | 1052477 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954911 |
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| Product | HemK family modification methylase |
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| Protein accession | YP_561932 |
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| Protein GI | 91792281 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00723704 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTAAAT CTTCATACTC GACAATAGCC GAAGTGCTGC AATGGGCCTA CTCTCAGTTG
GCCTCAAGCT CAGATACTGC CCATGTGGAT GCAGAAGTCT TGTTACTGCA TTGTCTCAAT
AAGCCCAAGA GCTTTATTTA CACTTGGCCT GAAAAAGCCT TATCTGTGCA GCAGTTTAGG
GCATTCAATA ATATGGTGCT TAAGCGCCAG CAGGGCGTAC CTGTGGCGCA TATTATTGGC
GAGCGTGAGT TCTGGTCATT GCCATTTATC GTCAATGAGT CAACGCTAAT TCCAAGGCCT
GACACCGAAA TCTTAGTGGA AACCGCCTTG AATTTAACCC TAAGCCCTCA TGCCAAGGTG
TTGGACTTAG GTACAGGCAC GGGGGCGATT GCCTTGTCGT TAGCCTCTGA GCGTCCTGAC
TGGAAAGTCA CCGCTATCGA TAAAGTGGAT GAGGCGGTGG AGCTGGCTAA GGCTAATCGG
CAAAACCTTA ACCTGCCCCA AGTGGAAATT TTACAATCAG ATTGGTTCAG TGCAGTTAAA
GACAGGGATT TTGATTTAAT CGTTTCCAAC CCACCCTATA TCGATGCAGA AGATGAGCAC
CTTAACTTAG GGGATGTACG CTTCGAGCCT CAGAGTGCGT TAACTGCGGG TGAACATGGT
TATGCGGACT TGTTCCATAT TGCCGAACAT GCCCGCGAAC ATTTAGTCCA TGGGGGCTAT
TTACTGCTAG AACATGGCTT TGAACAAGCC ATCAAGGTGC GTGAAAAACT CATCGAGTTA
GGTTATCAAC AGGTCGCCAC AGTGCGTGAC TTTGGTAGCA ACGACAGGTG CACCTTGGGC
CATTGGCTGA GTTAA
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| Protein sequence | MTKSSYSTIA EVLQWAYSQL ASSSDTAHVD AEVLLLHCLN KPKSFIYTWP EKALSVQQFR
AFNNMVLKRQ QGVPVAHIIG EREFWSLPFI VNESTLIPRP DTEILVETAL NLTLSPHAKV
LDLGTGTGAI ALSLASERPD WKVTAIDKVD EAVELAKANR QNLNLPQVEI LQSDWFSAVK
DRDFDLIVSN PPYIDAEDEH LNLGDVRFEP QSALTAGEHG YADLFHIAEH AREHLVHGGY
LLLEHGFEQA IKVREKLIEL GYQQVATVRD FGSNDRCTLG HWLS
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