| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0918 |
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| Symbol | |
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| ID | 4016824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1048395 |
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| End bp | 1049006 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954908 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_561929 |
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| Protein GI | 91792278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.126701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTTA ATTTAAATCA TACTCTTCTG CTCTGCCTGC TCGTTGCTGC AAGCCTATTA
TCAGGCTGTT CCAGCACCTT AGGCGAGCAA TACCAAACCT TAAACGTGAG CCAAAGCAAG
CAGGCTAAGG CGTGGGAGTT GCAAGGTAAG ATTGCGGTAA AATCCCCCAC AGACAAATTC
AGCACCAACC TTTATTGGTT TCATCTAGGT GAAGAAAATC AACTGAGCTT AACCACTATG
CTTGGCACCA CAGTGCTAAC ACTCAACAGT AAGCCAGGCC TTGCAAGACT CGAAGTCGAC
GGTAAAGAAT ATGTGGACAG CAATCCCCAG GACTTATTAG AAGCCGTCAG TGGTTGGTCT
ATTCCCTTAG ATAACTTACC CTTATGGATC ACAGGTCAAG TGGGGGTTAA TGATGAAATC
AGCGCCTATC ATGACGATGG TTTGATTAAG AGCTTGATAA GCCCAGCCCC TGAGCACAAC
TGGCAAGTGA GCTTTTTAAG CTGGCAGCAA CAAAGCGGCG CCAGCGTGCC TAAGCAAATT
AAAATTGAGC GTGCAGGCGT ACAAGTAAGA ATTCAGATAA ATCGCTGGCA AGCGCTCAAA
ACTCAGCAAT AA
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| Protein sequence | MPVNLNHTLL LCLLVAASLL SGCSSTLGEQ YQTLNVSQSK QAKAWELQGK IAVKSPTDKF
STNLYWFHLG EENQLSLTTM LGTTVLTLNS KPGLARLEVD GKEYVDSNPQ DLLEAVSGWS
IPLDNLPLWI TGQVGVNDEI SAYHDDGLIK SLISPAPEHN WQVSFLSWQQ QSGASVPKQI
KIERAGVQVR IQINRWQALK TQQ
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