Gene Sden_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0916 
Symbol 
ID4016822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1046424 
End bp1047371 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content50% 
IMG OID637954906 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_561927 
Protein GI91792276 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGACA TCAAGCTCTT TACTGGTAAC GCTACCCCTA ATCTAGCCAA AAAGATCGCC 
GACCGTCTAT TTTGCAAACT TGGAGATGCC GTTGTAGGCC GTTTCAGCGA CGGTGAAATC
AGCGTTCAGA TCAACGAAAA TGTACGTGGC GCGGATGTCT TCATCATCCA ATCTACTTGT
GCACCGACAA ACGATAACCT AATGGAACTC ATAGTGATGG TCGACGCCTT GCGCCGCGCC
TCCGCTGGCC GCATTACTGC GGTAATCCCG TATTTTGGTT ACGCCCGTCA AGACCGTCGC
GTTCGTAGTG CCCGTGTGCC TATCACAGCT AAAGTGGTTG CCGATTTCCT TTCAAGCGTG
GGTGTAGACA GAGTATTAAC CTGTGACTTA CACGCTGAAC AAATTCAAGG TTTCTTCGAT
GTGCCAGTAG ATAACGTATT CGGTAGCCCA GTGCTATTAG AAGACATGCT AGCCAAGAAG
CTTGATAACC CTGTGGTTGT CTCTCCTGAC ATCGGCGGCG TAGTGCGCGC TCGCGCGGTT
GCTAAGTTAC TTGATGACTC AGATCTTGCC ATCATAGACA AACGTCGCCC TATGGCGAAC
GTGGCTCAAG TCATGCACAT CATTGGTGAT GTACAAGGCC GTGACTGCAT CATAGTCGAT
GACATGATTG ACACTGGTGG CACACTTTGT AAGGCAGCAG AAGCCTTAAA AGAGCACGGT
GCTAACCGCG TATTCGCTTA CGCCACTCAC CCAGTGTTTT CTGGCAAAGC GGCTGAAAAC
ATCGCCAACT CAGTGATCGA TGAAGTGATA GTAACCGACA CTGTGCCATT AAGTGATGAG
ATGCTCGCCG TCAGCAAAGT CACTCAGTTG ACTATGTCAG GCGTACTTGC AGAAGCCATC
CGCCGCGTCA GCAACGAAGA ATCAATCTCG GCCATGTTTA GTCACTAA
 
Protein sequence
MPDIKLFTGN ATPNLAKKIA DRLFCKLGDA VVGRFSDGEI SVQINENVRG ADVFIIQSTC 
APTNDNLMEL IVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV
GVDRVLTCDL HAEQIQGFFD VPVDNVFGSP VLLEDMLAKK LDNPVVVSPD IGGVVRARAV
AKLLDDSDLA IIDKRRPMAN VAQVMHIIGD VQGRDCIIVD DMIDTGGTLC KAAEALKEHG
ANRVFAYATH PVFSGKAAEN IANSVIDEVI VTDTVPLSDE MLAVSKVTQL TMSGVLAEAI
RRVSNEESIS AMFSH