| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0910 |
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| Symbol | |
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| ID | 4016719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1037517 |
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| End bp | 1038794 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637954900 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_561921 |
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| Protein GI | 91792270 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000169324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAA CAAATGAAGC TTTGATGGCC CGCCGCCTTG CGGCTGTGGC GCCGGGAGTC
GGCCATGTTC ATCCCATTTT CACCCAAAGG GCAGAAAACG CCACAGTATG GGATGTGGAA
GGGCGCGAGT ATATCGACTT TGCAGGCGGG ATTGCCGTGC TCAATACTGG TCACCTTCAC
CCTAAGGTCA AGGCGGCGGT GCAAGCTCAG CTTGAGGACT TCTCCCATAC CTGCTTTATG
GTGCTAGGTT ATGAGAGTTA TATCCAAGTG TGCGAAAAGC TGAATCAACT GGTGCCAGGG
GATTTCCCTA AGAAAAGCGC CCTGTTTACC AGTGGCTCTG AAGCGGTAGA AAATGCCATC
AAGGTGGCCA GGGCTCATAC TAAGCGCGCG GGCGTAATTG CCTTTACCTC GGCTTATCAT
GGCAGGACTA TGGCAACGCT GGCATTGACT GGCAAAGTGG CGCCCTACAG CAAGGGCATG
GGGCTGATGT CGGCTAACGT GTATCGGGCG CTTTTCCCTT GTGAGCTTCA TGGGGTGTTT
GAAGACGATG CCATGGCATC CATCGAGCAA ATTTTTAAAA ATGATGCTGA GCCCAGCGAT
ATTGCGGCGA TCATTTTAGA ACCTGTGCAA GGGGAAGGTG GCTTCTATGC CGCGACGCCA
GCCTTCATGA AGCGCCTTCG GGATTTATGC GATCGAGAAG GCATCATGCT TATTGCCGAT
GAAGTGCAGA CGGGGGCTGG TCGCACCGGC ACTTTCTTCG CCATGGAACA AATGGGGGTG
GCGGCGGATA TCACTACCTT CGCCAAATCC ATTGCCGGCG GTTTTCCGCT TTCAGGGATC
ACAGGACGAG CAAGTGTCAT GGATGCCATC GCAGCTGGAG GCCTAGGCGG CACCTATGGC
GGTAGCCCTA TTGCTTGCGC CGCAGCACTG GCCGTCATTG AGGTGTTTGA GCAAGAGAAC
TTACTCGAGC GGGCTAACAG AATGGGCGAG CATATCAAAG CGCGACTGGC GGTGATGCAG
GCTAAGTATA AGCAAATTGC CGAGGTACGA GGCCTTGGTG CCATGATTGC CATCGAGCTG
ATGGAAGACG GTAAACCTGC CCCTGAATAT TGCCCGAAAA TATTAACCGA GGCGAGAAAT
CTTGGTTTGA TCTTATTGTC CTGCGGCACC TATGGCAACG TGCTTAGAGT TCTCGTACCG
CTAACTGCGC CCGATGAGCA GCTCGATGCA GGGCTAGATA TTATGGCAAC TTGCTTCGAT
AAAGTTTTTA AACCTTAA
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| Protein sequence | MSTTNEALMA RRLAAVAPGV GHVHPIFTQR AENATVWDVE GREYIDFAGG IAVLNTGHLH
PKVKAAVQAQ LEDFSHTCFM VLGYESYIQV CEKLNQLVPG DFPKKSALFT SGSEAVENAI
KVARAHTKRA GVIAFTSAYH GRTMATLALT GKVAPYSKGM GLMSANVYRA LFPCELHGVF
EDDAMASIEQ IFKNDAEPSD IAAIILEPVQ GEGGFYAATP AFMKRLRDLC DREGIMLIAD
EVQTGAGRTG TFFAMEQMGV AADITTFAKS IAGGFPLSGI TGRASVMDAI AAGGLGGTYG
GSPIACAAAL AVIEVFEQEN LLERANRMGE HIKARLAVMQ AKYKQIAEVR GLGAMIAIEL
MEDGKPAPEY CPKILTEARN LGLILLSCGT YGNVLRVLVP LTAPDEQLDA GLDIMATCFD
KVFKP
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