Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0909 |
Symbol | |
ID | 4016718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1036041 |
End bp | 1037507 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637954899 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_561920 |
Protein GI | 91792269 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.107387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGCTAT CCAGCATTCA AGAATTATCA GATCCTAGTT TGTTTCGTCA GCAAGCGTAT ATCAATGGGG CTTGGTGTGA TGCCCTTAGC GGCGAGACTA GCCTTATTCT CAACCCTGCA ACCCAGTTGC CTCTGGCTCG TGTGCCGCAT ATGGGGGCAA AGGAAACTCA GTCTGCTATT GATGCGGCTG CAGGAGCTTT GCCCGCGTGG CGAGCGCTGA CGGCAAAAGA GCGCAGTAGC AAGCTTAGGC GTTGGTTTGA ATTGATTATT GAGAACACAG ACGATCTTGC CCTTATCATG ACCCATGAGC AGGGTAAGCC ACTGTCTGAA GCCAAGGGCG AAGTGGCCTA TGGTGCCGCT TTTATCGAAT GGTTTGCCGA GGAGGCCAAG CGAGTCTATG GCGATACCAT TCCAGGCCAT CAAGCAGATA AACGCATCAC TGTCATACGC CAAGGTGTGG GGGTGACGGC GGCCATTACC CCATGGAACT TCCCCTTAGC TATGATCACC CGTAAAGCCG CACCAGCGCT GGCGGCAGGT TGCACCATGG TGGTAAAACC TGCACAGCAG ACGCCTTTTT GTGCATTGGC GCTTGCAGAG CTTGCCCACA GAGCGGGGAT CCCCAAAGGG GTATTCAATG TGGTGCCGGG GGATGCTATC GCCATAGGTA ATGTGCTGTG CGAGAGCCCC ATAGTGCGCA AATTATCCTT TACCGGCTCG ACGCCAGTGG GCATCACCTT GATGCAACAG TGTGCGCCGA CCCTTAAAAA ACTCTCCTTG GAGCTTGGCG GTAACGCGCC CTTTATCGTG TTTGATGATG CGGACCTTGA TGCAGCGGTA GAAGGCGCCA TGATAGCCAA ATACCGTAAT GCGGGGCAGA CTTGTGTGTG TGCTAATCGC ATCTATGTGC AGGCAGGGAT TTATGATGCC TTCGCCACTA AGCTGGTTGC CGCGGTGAAT AAGCTCAATT TAGGTAATGG GCTCAAAGAC GGGGTGACCA CAGGGCCACT GATTAATGCC GCGGCCGTGG CTAAGGTGAC TGAACATATC AATGATGCCC TAGATAAAGG CGCTAAGGTG TTAGTGGGCG GCAAGCGCCA TGGGTTAGGC GGTAACTTCT TTGAGCCGAC CGTGCTTAGC CAAGTGAACG CCAGTATGCG GGTCGCCAAG GAAGAAACCT TCGGCCCACT GGCGCCCTTG TTTAAATTCG ATGATGTGGA TGATGTGATA GCTCAGGCCA ATGACACAGA ATTTGGTTTG GCGGCGTATT TCTATTGCCG CGATATCTCC TTAGTTTATA AGGTGGCTGA AGCCCTAGAG TACGGCATGG TGGGGGTGAA TACTGGGCTT ATCTCCACAG AAGTGGCCCC CTTTGGCGGG ATTAAATCAT CGGGCCTTGG CCGTGAAGGC TCAAAATATG GCATCGAAGA ATACTTAGAA ATGAAATACA TCTGTATGTC GGTATAG
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Protein sequence | MQLSSIQELS DPSLFRQQAY INGAWCDALS GETSLILNPA TQLPLARVPH MGAKETQSAI DAAAGALPAW RALTAKERSS KLRRWFELII ENTDDLALIM THEQGKPLSE AKGEVAYGAA FIEWFAEEAK RVYGDTIPGH QADKRITVIR QGVGVTAAIT PWNFPLAMIT RKAAPALAAG CTMVVKPAQQ TPFCALALAE LAHRAGIPKG VFNVVPGDAI AIGNVLCESP IVRKLSFTGS TPVGITLMQQ CAPTLKKLSL ELGGNAPFIV FDDADLDAAV EGAMIAKYRN AGQTCVCANR IYVQAGIYDA FATKLVAAVN KLNLGNGLKD GVTTGPLINA AAVAKVTEHI NDALDKGAKV LVGGKRHGLG GNFFEPTVLS QVNASMRVAK EETFGPLAPL FKFDDVDDVI AQANDTEFGL AAYFYCRDIS LVYKVAEALE YGMVGVNTGL ISTEVAPFGG IKSSGLGREG SKYGIEEYLE MKYICMSV
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