| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0905 |
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| Symbol | |
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| ID | 4016714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1031416 |
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| End bp | 1032027 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954895 |
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| Product | TonB-like protein |
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| Protein accession | YP_561916 |
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| Protein GI | 91792265 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAA ATAACCTGTT TAGCCGCAGT GCCATAACCA TGAGTGGTGC TTTCATAACA
CTGATTTTAT TTATTTTTAT GTCGCAGCTT GTTAAAAATG ATCAAATATT CACAGGCACA
GCGACAGAAG CGCCAATACT GCATTTTTTG CAAGACATTC CCGAGCCTAC AGCGCCGCAG
AAAATCCAAC GGCTTCAGCC TCCTGCGGTA ACGCCAAGAC CTGTGCCCAC TAGCGTGCCG
CAAAACACAA CGCCTGGTGT AGACTCTATC ACCAGTATTG CGCCACCTGT CATGCCTACG
CCAACCGAAA CCTTTGGCCG TGAGGCGGCT TCTGCCGATG CTATGCCAGT TATCCAAATT
TCACCCCAAT ACCCGATCGC GGCCGCCAGA GATGGCAAAG AAGGCTTTGT GGTTGTCGAA
TTTGATATCA GTACCTTAGG TGCTGTGATT AACGCTAAGG TCATAGATGC CGAACCAAAA
CGTATTTTCG ATAAAGCGGC TATCCATGCC ATTAAGGGTT GGAAATATAA GCCTAAAATG
GAGCAAGGTA ACCCAGTAGA AGTTCGCAAA CAGAAAGTCA GGTTAGACTT TTCATTAGAT
CAGGCTCAAT AA
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| Protein sequence | MTQNNLFSRS AITMSGAFIT LILFIFMSQL VKNDQIFTGT ATEAPILHFL QDIPEPTAPQ
KIQRLQPPAV TPRPVPTSVP QNTTPGVDSI TSIAPPVMPT PTETFGREAA SADAMPVIQI
SPQYPIAAAR DGKEGFVVVE FDISTLGAVI NAKVIDAEPK RIFDKAAIHA IKGWKYKPKM
EQGNPVEVRK QKVRLDFSLD QAQ
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