Gene Sden_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0902 
Symbol 
ID4016711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1029249 
End bp1030061 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content44% 
IMG OID637954892 
Productregulatory protein RecX 
Protein accessionYP_561913 
Protein GI91792262 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGCC CAACCCTACG ACAAGCCAAG ACCATAGAGA ATGTGTTTAA CAGTGCTTAT 
TGGCACCTTG GTCAGCAAGA TTTCACCATT AATGAAATTC GCGCCAAACT TGAGCGTAAA
ACCGACAATC AACAATGGAT TGACGAAGTA CTGGCTAAAC TCATAGACAA CGGTTATTTA
AAAAGTGACC ATGACTTTGC CGTGCGATAT TGTGAAATGG CCTTCAGTAA TGAGCTAGGC
AAAGGTGCGA TAAAACGTAA ATTACAACTG CGGGGCATCA AGGAAGCCGA AATCGATGCC
GCCATAGCAC AAGTGATGGA TGAGCAAAAC GTCGATGCCT TCGAGATGGC GGCTGCTAGG
CTGCTTAATA AATATGATAA TTTTTATGGC ACCAATAGAG AGAAAGTTCA TGCCCAGATG
ACCACTAAAG GCTTCTCGCG GGCCGAAATA GAACATGCCA TCTCACAGCA CCCAGCCCAA
GACACACTGC GCAGTAAATT AGCCGTAAAA GCCGACAAGG TGAACTTAGC CACTGAGATC
ATCAAACTCT TTAATAAAGG CAAGGGCAAG ACCCTCATCT TGCAGGAACT TAAACAGCGG
TTGATTGATG TGAGCGACTT TGAAGAGACG CTGTATCAAC TGAGTCTGAC AGAGGAAATC
GACTTTTATC GAAGCTGTAA AAATGAGCTG GCAAAAAAAC GCTATGACTT ATCGGACTAT
AAAGACAAGT CAAAAGCCTA TGGCTATTTA TCCCGAAAAG GCTTTAGCAG TGATGAAATA
AAAGAGGCCA TGGCGCTAGG TGACGACTCA TAG
 
Protein sequence
MQRPTLRQAK TIENVFNSAY WHLGQQDFTI NEIRAKLERK TDNQQWIDEV LAKLIDNGYL 
KSDHDFAVRY CEMAFSNELG KGAIKRKLQL RGIKEAEIDA AIAQVMDEQN VDAFEMAAAR
LLNKYDNFYG TNREKVHAQM TTKGFSRAEI EHAISQHPAQ DTLRSKLAVK ADKVNLATEI
IKLFNKGKGK TLILQELKQR LIDVSDFEET LYQLSLTEEI DFYRSCKNEL AKKRYDLSDY
KDKSKAYGYL SRKGFSSDEI KEAMALGDDS