| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0898 |
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| Symbol | def |
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| ID | 4016707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1024284 |
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| End bp | 1024787 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954888 |
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| Product | peptide deformylase |
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| Protein accession | YP_561909 |
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| Protein GI | 91792258 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTTT TAGACATTCT GAAAGCTCCA AATGAGAAGC TAAAAGTCAC AGCGAAAAAA
GTGAGCAATA TTGAACAGGT GCAGAGTCTC ATCGATGACA TGCTGGATAC CTTGTATCAC
ACTGAAGATG GCATAGGCTT AGCCGCGACT CAGGTGGGCA GAAACGAAGC CATAATCATC
ATAGATATAT CAGAAACTAG AGATTCCCCT TTGATCCTCA TCAACCCAGA AGTCATCGAG
GGTACGAATA TCGAGAAAGG ACAGGAAGGC TGCTTATCCG TACCTGGTTA TTATGCCGAT
GTGGAGCGTT TTAGCCGCGT GAAAGTGACA GGCTTAGATC GACACGGCAA CGAAGTGATT
ATCGACAATG ATGATTTTCT TGCCATCGTA TTGCAACACG AAATCGATCA CTTAAAAGGC
GTGCTCTTTA TCGATTACCT GTCGCCGTTA AAGCAAAGCA TGGCGTTAAA AAAGGTCAAG
AAGGCGATCA AAGCGGCGGC CTAA
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| Protein sequence | MAVLDILKAP NEKLKVTAKK VSNIEQVQSL IDDMLDTLYH TEDGIGLAAT QVGRNEAIII
IDISETRDSP LILINPEVIE GTNIEKGQEG CLSVPGYYAD VERFSRVKVT GLDRHGNEVI
IDNDDFLAIV LQHEIDHLKG VLFIDYLSPL KQSMALKKVK KAIKAAA
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