Gene Sden_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0890 
Symbol 
ID4016991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp1016565 
End bp1017227 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID637954880 
ProductYceI 
Protein accessionYP_561901 
Protein GI91792250 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATCA AATTACTAGC CAGCATTTCT TCAAGCATTA GGAGCGCCTC CCTCAACTTG 
AGCCTGCTGT TATGCTTGTC CTTAGGTTTG TCTTTAACTG GCTGCATCAG TTTAATTGCC 
CCGAAAGTCA CTCCTGAGCT TGCCGCACTT AAACCAGGGC AATATAAACT CGACCCAAAC 
CATGCCTCAT TGGTGTTTAA AATCCAGCAT TTAGGGCTTT CAACCTATGT GGGCCGATTT 
AACCAATTAC AGGCCAACTT AGATTTTACT CCCGAGAATA TGGCTGCCGC CAAACTCGAA 
GCCGAAGTGA TTATCGCCTC AATCGATGTT AATAATCTAA CACTCGAACA AACCCTGCAA 
GACAGCACTT GGTTTGACAG TGAGCAGTTC CCAAAGGCGC ATTTTATCAG TGAGTCTGTG 
ACCCAAACAA GCAATGGGGA ATTTGTGTTT CATGGCAAAC TGACTTTGCA TGGCATAACG 
AGGCCCATAA GCTTTAATGC TCGCTTTCAT GGCGGCGCCG ATAATTGGAT GACGGGAAAA 
TACACCTTAG GTTTTAGCGC TAATGCCAGC ATCAAGCGCG CCGACTTTGG CATGACAAGT 
TACATCCCCA TAGTCGGCAA TGACGTCCAA CTTGAGATCC ATGCCGAATT CTTGAAGGAA 
TAA
 
Protein sequence
MFIKLLASIS SSIRSASLNL SLLLCLSLGL SLTGCISLIA PKVTPELAAL KPGQYKLDPN 
HASLVFKIQH LGLSTYVGRF NQLQANLDFT PENMAAAKLE AEVIIASIDV NNLTLEQTLQ 
DSTWFDSEQF PKAHFISESV TQTSNGEFVF HGKLTLHGIT RPISFNARFH GGADNWMTGK 
YTLGFSANAS IKRADFGMTS YIPIVGNDVQ LEIHAEFLKE