| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0886 |
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| Symbol | |
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| ID | 4016987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1010579 |
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| End bp | 1011880 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954876 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_561897 |
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| Protein GI | 91792246 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCG AATCTTTTAG CTTCGCCCCA GAAATTTTAC GCGCGATCGC TGAGTGCGGT
TATCAGAATA TGACGCCAGT GCAGCAACAA GCTATTCCAG CTATTCGCCG CGGTGAAGAC
GTATTAGCCA GCGCACAAAC CGGCACAGGC AAGACAGCCG CGTTCGCCCT GCCTATTCTG
CAAAAAATGC ATGAAAGACC TATGACGGTG CAGCATTCAA ATGCCCGCGC GCTTATTTTA
ACCCCAACTC GCGAGCTCGC CGCCCAAGTT GCCGACAATA TCAGCGCCTA CAGTAAGCAC
ATGAACATCA GCGTGCTCAC CATCTACGGC GGCATGAAAA TGGCCACCCA AGCGCAAAAG
CTTAAGCAAG GCGCCGACAT CATAGTGGCA ACCCCAGGTC GTTTACTCGA GCACATAGTG
GCCTGTAATT TAAGCCTGTC AAATGTGGAA TTCTTAGTAT TAGACGAAGC CGACCGCATG
CTCGATATGG GTTTCAGCAC AGATATCCAA AAAATTCTTC AAGCCGTGAA TAAGAAAAGA
CAGAATCTGT TATTTTCAGC CACCTTCTCA ACGGCGGTTA AAAAGCTTGC CAATGACATG
CTGGACAAGC CAAAAATTAT CAGCGCCGAC AAGCAAAACA CCACGGCTGC CACCGTAAGC
CAGGTGGTTT ACCCCGTTGA GCAGCGACGT AAGCGCGAAT TATTATCAGA ACTTATTGGC
ACCAAAAATT GGCAGCAGGT ACTGGTGTTT ACCGCCACCC GCGCCGATGC AGACAAATTA
GTCACAGAGC TTAACTTAGA TGGTATTCCG TCGGCCGTAG TGCATGGCGA GAAAGCCCAA
GGCAGCCGTC GCCGCGCCCT ACGTGAATTT ATTGAAGGCA AGGTACGGGT CTTAGTGGCT
ACCGAAGTTG CCGCCCGTGG TCTAGACATT CAAGGTTTAG AATACGTGGT CAACTATGAC
TTGCCCTTCC TTGCTGAAGA TTACGTGCAC CGTATTGGCC GTACCGGCCG TGCGGGTAAG
ACAGGGGTTG CCATTTCATT CGTTAGCCGC GAAGAAGAGC GCACTCTTGC TGACATCGAA
AAGCTTATCG GCCAGAAAAT TCGCCGCATT ACCGTGCCAG GTTATGAAGT CAGCAGCCGC
GAGCTACTGC TTAAAACCAT AGAGAAGCGT CGCAGCTTTG GTAAGAAGCA GGAGCGTAAC
GATAACGTCG GCGCTCAGGT TGTGGGTGAG AAAAACATGC AAGGTCGCCG CGTCAAAGTA
GGCAAACCTA CCAGCACAGT AAAATACAAG AAGATTAAGT AA
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| Protein sequence | MKFESFSFAP EILRAIAECG YQNMTPVQQQ AIPAIRRGED VLASAQTGTG KTAAFALPIL
QKMHERPMTV QHSNARALIL TPTRELAAQV ADNISAYSKH MNISVLTIYG GMKMATQAQK
LKQGADIIVA TPGRLLEHIV ACNLSLSNVE FLVLDEADRM LDMGFSTDIQ KILQAVNKKR
QNLLFSATFS TAVKKLANDM LDKPKIISAD KQNTTAATVS QVVYPVEQRR KRELLSELIG
TKNWQQVLVF TATRADADKL VTELNLDGIP SAVVHGEKAQ GSRRRALREF IEGKVRVLVA
TEVAARGLDI QGLEYVVNYD LPFLAEDYVH RIGRTGRAGK TGVAISFVSR EEERTLADIE
KLIGQKIRRI TVPGYEVSSR ELLLKTIEKR RSFGKKQERN DNVGAQVVGE KNMQGRRVKV
GKPTSTVKYK KIK
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