| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0873 |
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| Symbol | |
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| ID | 4016974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 997736 |
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| End bp | 998791 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954863 |
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| Product | permease YjgP/YjgQ |
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| Protein accession | YP_561884 |
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| Protein GI | 91792233 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000147876 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTAG ACTTGTATAT TGCCAGAGCG ATATTGGCGA CATCATCACT GTGCTTACTT
ATTCTTACGG GTTTGTCCGG CATTATTAAG TGGGTCGACC AGCTTAGGCT TGTGGGGCGC
GGCAGTTATA CCATGATAGA TGCTGGCATT TATGTGTTGT TCCTTATCCC ACGTGATATT
GAAATGTTTT TCCCCATGGC CGTGCTGTTA GGGGCCTTGA TTGGCATGGG CATGCTGGCT
TCTAGCTCTG AATTAGTGGT GATGCAGGCT TCAGGTATGT CACGGTTACA AATAAGCATG
TCGGCGATGA AAACTGCAGT TCCCTTAATG CTGTTAGTCA TGGTTCTAGG GGAGTGGGGC
GCGCCAGTCG CCGAGCGAAG TGCTAAAGAG CTGCAAGCAA CAAAACTTTC TGGCGGGAGT
CTAATCAAGT CTCACCGCGG CATTTGGGCA AAAGACGGCG ATTTATTTGT CAATATTGGC
GAAGTGGAAA CGGTAAATTC ATTAAATAAT ATCACCTTGT ATGAGTTTGA TGAGGCGATG
AAATTAGTTA AAGTTATCCA TGCGCAGGAA GCTCAATTTA AGGATGAGGC ATGGCAATTA
CAACAAGTGA AAACCACAGT GTTTAGCGAC GAAAAAATCA CCTTGGTGGA GCAGCCTCTG
CAGAGTTGGA ATTCAAGTTT AACCCCAGAT AAGTTAGGGG TAGTGTCGGT GAAACCTGAG
GCGTTATCGA TACAAGGCTT GTTGGATTAT TTAGATTATT TAGAAGTGAA TCAGCAAGAC
CCAAGTCGCT ACAATTTGGC GCTATGGCGT AAAATCATGC AACCTGTGAC CATAGCCGTG
ATGATGTTGG TGGCACTATC CTTTGTGTTT GGTCCACTGA GAACTGTGAC TATGGGGGCT
CGAGTATTGC TGGGCGTGGT GGCAGGTTTT GGCTTCTACA TTAGCAATCA AATCTTCGGC
CCCATGAGCA TAGTCTATGA ACTGCCCGCC GCAGTAGGCG CCATAGCACC TAGCCTGTTA
TTTACCACGG CAGCCGTCTA TTACATTCGA AAATAA
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| Protein sequence | MILDLYIARA ILATSSLCLL ILTGLSGIIK WVDQLRLVGR GSYTMIDAGI YVLFLIPRDI
EMFFPMAVLL GALIGMGMLA SSSELVVMQA SGMSRLQISM SAMKTAVPLM LLVMVLGEWG
APVAERSAKE LQATKLSGGS LIKSHRGIWA KDGDLFVNIG EVETVNSLNN ITLYEFDEAM
KLVKVIHAQE AQFKDEAWQL QQVKTTVFSD EKITLVEQPL QSWNSSLTPD KLGVVSVKPE
ALSIQGLLDY LDYLEVNQQD PSRYNLALWR KIMQPVTIAV MMLVALSFVF GPLRTVTMGA
RVLLGVVAGF GFYISNQIFG PMSIVYELPA AVGAIAPSLL FTTAAVYYIR K
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