Gene Sden_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0870 
Symbol 
ID4017065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp993068 
End bp994612 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content46% 
IMG OID637954860 
Producthypothetical protein 
Protein accessionYP_561881 
Protein GI91792230 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0826211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATT TAGTGATTTG CTGTGATGGA ACGTGGAACA ATCCACAGCA AGAAGATAAC 
GGAGTACCGT CCCCAACCAA TGTGTATAAG CTCGCCAATG CCATCGCTCC TTTGGACAAT
AACGGTGATA AGCAGATGGT TTATTATCAC CCAGGCCTTG GTGGTGAAGA TTCTGGCCTT
AAAGATGCCA TAGTTGATGG AGCACTTGGC GTCAGTATCA AGCGTCATAT TTCCAGTGCT
TATTATTGGT TGGCTACCCA TTACAAGCCT GGTGATAGTG TCTCAGTTTT TGGTTTTAGC
CGCGGCGCGT TCACGGCGCG CAGTCTTTGT GGGTTATTAA AACAGGGCTT GTTGGACTTC
AAAGGTTTAT CAGAGAAAGA GTCATGGCAG CGCACTCATG ATTTATATGA TTTCTATAAA
AGGGTGGGCG CCGCACTCAC ACCTAGCTTC TTTATGGATA ATGCTGCCCC CTTCAAGGTG
CATTTTCTGG GGGTGTGGGA CACAGTTGGC GCCTTAGGGA TCCCTAACGA TTTAGAATTT
TTAAATTTGT TTGATGACCC TGAACGCTGG CGTTTTCATG ACACTGTGCT TGGGGATAAT
GTTAGCATCG CGCGCCATGC CATGGCTTTG GATGAAAAAC GCAGCAGTTT TACTGTGACT
CGCTGGAGTA ATGCGGACAG CCATAACAAT GCCAAAGAAA TGTGGTTTTC TGGGGTGCAC
AGTGATGTCG GCGGCGGTTA TGCGGATTGC GGTTTGGCAG ACATATCCCT TAACTGGATG
ATCGAAGAAG CGACTAAGGT CAGTGAACAA GGCAATAAGC TAACGTTTAG GCCGGGCATT
TCTGCACTGA TGAAACCGGA TCCTAACGCT GTGTTACATA ATTCTTATAA AGGTGTTTTT
AGTAAATTAC GTTCAAGACC TCGCAATATA GGTGCCGTGC TTCCAGCGAA TGAAGCCTAT
TTTCATTCCA GTGTCTTTGC CCGTCAAGCC TCATCTCCAT TAGCCTATCC TGCCTATTGG
CCAACTCAGT CACTGGCGGT GGGAGAGTCT TTGGCTGTGG ATGTGTTTGC TAAAAAACAC
TGGAACCCGG CTAATTTGTA TATGGAAAAA GGTCAAAAAT ATTGCTTTAG TGCAACGGGT
CAATGGCAAG ACAGTAAAGA TACCTGCGAT TGGAAAGGCA CTGAACACGG TAACCTCACT
GGCGGGGATA TCGTTCGCGC TGCCTCATCC TTATGGGGGA TTACCGAGCG GGCATTTATG
AAAATCACCA AAAACAAATT CACGGATTTC TGGGGCACCA AGCGAGTCGA ATCCTTAGAG
TGGTTTGTTG CCGTAGGTTG TATCGCCAAT GATGATGGTG TACTCAATGC GGTTAATAAC
GACGGCAGTC CAGAACCCCA TAAGTATTTT GCTTTGCCTG ACCATGAGCA GCATGGCTTA
GAGGTGAAAA ATAGCGGCTA TTTTTATGCT TTCGCTAACG ATGTCTGGTC TTTGTATAAC
AACAATCATG GCAGCATTAC GCTTACTATC ACGCGCATCG AATAA
 
Protein sequence
MANLVICCDG TWNNPQQEDN GVPSPTNVYK LANAIAPLDN NGDKQMVYYH PGLGGEDSGL 
KDAIVDGALG VSIKRHISSA YYWLATHYKP GDSVSVFGFS RGAFTARSLC GLLKQGLLDF
KGLSEKESWQ RTHDLYDFYK RVGAALTPSF FMDNAAPFKV HFLGVWDTVG ALGIPNDLEF
LNLFDDPERW RFHDTVLGDN VSIARHAMAL DEKRSSFTVT RWSNADSHNN AKEMWFSGVH
SDVGGGYADC GLADISLNWM IEEATKVSEQ GNKLTFRPGI SALMKPDPNA VLHNSYKGVF
SKLRSRPRNI GAVLPANEAY FHSSVFARQA SSPLAYPAYW PTQSLAVGES LAVDVFAKKH
WNPANLYMEK GQKYCFSATG QWQDSKDTCD WKGTEHGNLT GGDIVRAASS LWGITERAFM
KITKNKFTDF WGTKRVESLE WFVAVGCIAN DDGVLNAVNN DGSPEPHKYF ALPDHEQHGL
EVKNSGYFYA FANDVWSLYN NNHGSITLTI TRIE