Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0868 |
Symbol | lipB |
ID | 4017063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 991727 |
End bp | 992410 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954858 |
Product | lipoate-protein ligase B |
Protein accession | YP_561879 |
Protein GI | 91792228 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAC TTTTTTACAA GGGAGAGGCA CTGTTGCTAC CTCAAACGCT ACATATCAGG CACCTTGGTC AGCAAGATTA CCAGACAGTT TGGCATGCGA TGCAAGCCTA TACCGACAAT CGCGGCGCAG ACAGTCAAGA TGAGCTGTGG ATTGTGGAGC ACACACCCGT GTTCACCCAA GGGCAGGCAG GCAAGAGCGA GCACATACTA AACCCGGGTG ATATCCCTGT CATTCAAGTG GATAGGGGCG GTCAAGTGAC CTACCATGGC CCGGGACAAT TAGTCGCCTA CCCTTTGATT GATATCAAGC GCGCCAAATT AGGGGTGCGC CAATTGGTTA ATCATATCGA GCAAAGCATA ATCGATATGC TTTCCCCTTA TGATATTAAG GCCTACGCCA AAACGGATGC CCCTGGGGTG TATGTCGATG AGCGTAAAAT AGCCTCTTTA GGCCTTAGAA TTCGCAAAGG CTGCTCTTTC CACGGTTTGG CATTAAATGT CGACATGGAC TTAGCTCCTT TTAGGCGCAT CAACCCTTGC GGCTATGCAG GGCTTGAAAT GGTGCAATCG AAAGCATTAA ATGGACCGCA AAGCGTGGTG GAAGCCGGAG ATAAACTTAT CGACACTTTC ACTAAAACCT TAGGTTACCA AGAAGTTATC CACCACCAAG GATTAGCAGA ATAA
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Protein sequence | MSQLFYKGEA LLLPQTLHIR HLGQQDYQTV WHAMQAYTDN RGADSQDELW IVEHTPVFTQ GQAGKSEHIL NPGDIPVIQV DRGGQVTYHG PGQLVAYPLI DIKRAKLGVR QLVNHIEQSI IDMLSPYDIK AYAKTDAPGV YVDERKIASL GLRIRKGCSF HGLALNVDMD LAPFRRINPC GYAGLEMVQS KALNGPQSVV EAGDKLIDTF TKTLGYQEVI HHQGLAE
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