| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0852 |
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| Symbol | |
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| ID | 4016816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 975390 |
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| End bp | 976283 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954842 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_561863 |
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| Protein GI | 91792212 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000569682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTA AGTGTAACCT AGCCTTACCC TTCACTGGGA TCATGAGTTC GCGGCTAAAG
ACCAGGGGTT TAAACCTCAA GCAATTGGGG GTGTTAGCCA TATGCAGCGT TTTAGTTGCC
TGTTCAAGCT CACCTTCAAG CTCTAAAGGG GCAAAGAGGG ACAGTCAGAG TGGCCGTTAC
CAGATGGCCA ATGACAGAGC CCCTGATAAT GCGCCCGACG TGAGCAAGGT GCCCAATGCT
GTGCCTAAAT ATGAGCCCTA CAGTCGTCAA GGCAATAAAG ACTATAGAGT GCTAGGTAAG
AATTATGCGG TATTGAACCA CGGCAAAGAT TTCCGTGAAC GGGGTATCGC CTCTTGGTAC
GGCTCAAAGT TTCATGGCCA CCTTACCTCC AACGGTGAGG TCTATGATAT GTATGCCATG
ACTGCCGCCC ATAAAACCTT ACCTATTCCA AGCTATGTCA AAGTGAGGAA TGAAGATAAC
AATAAGGAAA TCATCGTCAG GGTTAACGAC CGTGGCCCGT TTCACGAAGG GCGAGTGATA
GATTTATCCT ACGCGGCGGC CTACAAGTTA GGGGTGCTCA GTACTGGTAC TGCAAGAGTC
AATATTGAAG CCATTTATTT CCCTACTCCC TCATCGAGGG CATTAGCCGA ACTTGCCGAC
CCTCATGTGA ATTTTATTCA AATCACAGCA TCGCGAGATA AAGTAAGAAT TAATCATCTG
GCACAGAAAT TGGAAGCTAA ATACGGCATC TCATCGAACA TAGAACCCGT AAACGGCTTC
TATCGACTCA GGCTGGGCCC AATAGGTCAA CGGCATATTG CTGATAAGCT GCTGCAAAAC
CTAAAGCGCG ACGGTTTTCC TGATAGTTTT ATGGTTGAGC AAGCTAAACC TTGA
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| Protein sequence | MQTKCNLALP FTGIMSSRLK TRGLNLKQLG VLAICSVLVA CSSSPSSSKG AKRDSQSGRY
QMANDRAPDN APDVSKVPNA VPKYEPYSRQ GNKDYRVLGK NYAVLNHGKD FRERGIASWY
GSKFHGHLTS NGEVYDMYAM TAAHKTLPIP SYVKVRNEDN NKEIIVRVND RGPFHEGRVI
DLSYAAAYKL GVLSTGTARV NIEAIYFPTP SSRALAELAD PHVNFIQITA SRDKVRINHL
AQKLEAKYGI SSNIEPVNGF YRLRLGPIGQ RHIADKLLQN LKRDGFPDSF MVEQAKP
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