| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0833 |
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| Symbol | gcvT |
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| ID | 4016797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 954579 |
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| End bp | 955673 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637954824 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_561845 |
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| Protein GI | 91792194 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00162887 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAATA AAACTGTACT GTTTCACAAG CATCTCGAAT CTAACGCCAA AATGGTGGAT
TTTCACGGCT GGGATATGCC GCTGAACTAC GGCTCACAAA TTGAAGAGCA CCACGCAGTG
CGTCAAGACG CAGGCATGTT TGACGTGTCT CACATGACAG TAGTGGACGT GACCGGCCAA
GACGCCCGTG ACTTCCTACG TAAATTATTA GCCAATGATG TTGCCAAATT GACTGTCCCA
GGCAAGGCCC TTTACGGCGG TATGCTGGAT GACAACGCCG GCGTTATCGA TGATTTGATC
ACCTATTACT TAAGCGACAC TCACTACCGC GTAGTAGTGA ACTCGGCCAC CCGTGAAAAA
GACTTAGCCT GGATAGCCAA GCAGTCGGCG CCTTTTAGCG TCACCATCAC AGAGCGCCCA
GAGCTTGCGA TGATCGCAGT GCAAGGCCCG AACGCCAAAG CCAAGGCCGC CACAGTATTT
ACCCCTGAGC AAAACAGCGC AGTAGAAGGC ATGAAGCCTT TCTTTGGCTT GCAATCAGGC
AGCTTGTTTA TCGCCACCAC AGGTTACACA GGTGAAGCGG GCTACGAAAT TATCGTCCCA
GAGCAAGACG CCGAAGACTT ATGGCAAGCG CTATTGAATA CCGGCGTTAA GCCATGTGGC
CTTGGTGCTC GTGATACCTT GCGTCTTGAA GCAGGCATGA ACCTCTATGG CCTAGACATG
GACGAAAGCA TCAACCCGCT AGCCGCCAAC ATGGGCTGGA CTATCGCGTG GGAGCCTAGC
GATCGCGACT TTATTGGCCG CGCTGCACTG ACCGAATTAA AAGCCCAAGG CACAGAAAAA
TTAGTCGGCT TGGTGATGGA AGAAAAGGGC GTTTTACGCC ATGATATGCC AGTATTCTTC
ACCGACAGTG ACGGCGTTGA GCAGCAAGGC TATATTACTA GCGGGACTTT TTCGCCAACA
TTGGGCTATT CTATTGCCAT GGCACGGGTG CCCGCGGGCA TAGGCGCCAT AGCCGAAGTG
GAAATGCGCA AGAAGCGCGT TGCCGTAAAA GTGATTGCCC CTAGCTTTGT GCGCAACGGT
AAGCAAGCCT TTTAG
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| Protein sequence | MANKTVLFHK HLESNAKMVD FHGWDMPLNY GSQIEEHHAV RQDAGMFDVS HMTVVDVTGQ
DARDFLRKLL ANDVAKLTVP GKALYGGMLD DNAGVIDDLI TYYLSDTHYR VVVNSATREK
DLAWIAKQSA PFSVTITERP ELAMIAVQGP NAKAKAATVF TPEQNSAVEG MKPFFGLQSG
SLFIATTGYT GEAGYEIIVP EQDAEDLWQA LLNTGVKPCG LGARDTLRLE AGMNLYGLDM
DESINPLAAN MGWTIAWEPS DRDFIGRAAL TELKAQGTEK LVGLVMEEKG VLRHDMPVFF
TDSDGVEQQG YITSGTFSPT LGYSIAMARV PAGIGAIAEV EMRKKRVAVK VIAPSFVRNG
KQAF
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