| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0832 |
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| Symbol | |
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| ID | 4017101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 953124 |
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| End bp | 954341 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637954823 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_561844 |
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| Protein GI | 91792193 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00361775 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAA CGCAAACCTT TGATGTTGCC ATAGTAGGTG GCGGCATGGT GGGGCTCGCC
ACCGCCATAG GTCTGGCGCT CAATGACATG AATGTGGTGG TCATTGACGC AGGTCATACC
CTGGACGTCA GCGGTGAGCC AAAACTTAGG GTCAGTGCCA TCAATCATGC CAGCCAGCAA
TTGTTGGAAA ACTTAGGCGC TTGGGGCTAT TTAGACTCGT CGCGCTTAAG CCCTTACAGC
AAGATGGCGG TATGGGATAA GGACGGCCTA GGGAAAATCG GCTTCGATGC CCATACCTTA
GCTCAAGCTC ACCTTGGCAC CATAGTGGAG AATCAGGCCA TTAGCGCCGC TCTTGCCAGC
CGCGCCAGTG AATTAAGCTC ATTGCACCAT ATTCAAGGCC AGCGGCTAGA GCGCTTAGCC
TTTGGCGAGC GCGAAGCCTG GCTGACCTTA GACAATGGCG ACAGCATCAG CGCCGCTGTG
GTGATTGCCG CCGATGGCGC CCATTCCTGG GTGCGAGAGC AATGCAAAAT CCCGCAAACA
TTTTGGGATT ACGGCCACCA TGCCATAGTC GCGACAGTCC GCACCGCTGA GCCACATCAA
GACACCGCAA GGCAAGTCTT CCTTCCCGAT GGCCCCTTGG CCTTATTGCC GCTGTTTGAG
GCGAATTTAC ACTCTATCGT CTGGTCGGTG CCGCCGGAGC AAGCCAGCCG ATTACTGAAC
ATGGACAAGG ATGAGTTTTC TAAGGCCTTA ACCGCCGCCT TCGATGCACG CCTTGGGGTG
TGTACGCTTG TGAGTGAGCG TCAAAGCCAC CCGCTAAGAA TGCGCTATGC GCGCCACTTT
GCCCGCCATA GGCTGATACT GGCAGGGGAT GCGGCCCATA CTATTCATCC CTTGGCGGGG
CAGGGGGTTA ATTTAGGCTT TCTCGATGCC GCCAGCATAG TACAAACCTT GACTGAGCTT
AATGAGCAGG GCCGAGACTT AGGCGATTAC GCTAACCTTA GGCCCTTAGA GCGTTGGCGC
AAGGCTGAAG CCATGGAGAT GATAGCGGCA ATGGAAGGCT TTAAACGCCT CTTTGAAGGC
AGTAATCCCC TTAAAAAAGC CATCCGCGAT CTGGGATTAA ACCTAGTGGA TAATGTCGCT
GGGCTGAAAA CAGTGTTCAT CAAACAGGCT ATGGGCTACA AAAGTGACTT GCCTAAGCTG
TGTAGGCCTT CAAATTAA
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| Protein sequence | MFSTQTFDVA IVGGGMVGLA TAIGLALNDM NVVVIDAGHT LDVSGEPKLR VSAINHASQQ
LLENLGAWGY LDSSRLSPYS KMAVWDKDGL GKIGFDAHTL AQAHLGTIVE NQAISAALAS
RASELSSLHH IQGQRLERLA FGEREAWLTL DNGDSISAAV VIAADGAHSW VREQCKIPQT
FWDYGHHAIV ATVRTAEPHQ DTARQVFLPD GPLALLPLFE ANLHSIVWSV PPEQASRLLN
MDKDEFSKAL TAAFDARLGV CTLVSERQSH PLRMRYARHF ARHRLILAGD AAHTIHPLAG
QGVNLGFLDA ASIVQTLTEL NEQGRDLGDY ANLRPLERWR KAEAMEMIAA MEGFKRLFEG
SNPLKKAIRD LGLNLVDNVA GLKTVFIKQA MGYKSDLPKL CRPSN
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