| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0828 |
|---|
| Symbol | |
|---|
| ID | 4017097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 949499 |
|---|
| End bp | 950260 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637954819 |
|---|
| Product | 5-formyltetrahydrofolate cyclo-ligase |
|---|
| Protein accession | YP_561840 |
|---|
| Protein GI | 91792189 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
|---|
| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000562613 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACA ATGCACAAGC GCAACACGCC ATCGATTTAA TGGGCCGTGT TGCTAATCCA
ACGCCCGTTA TGGCAGCCAG TGATCCTATC TCAAATGTGG CGTATTTTTC CTCCAGCGCC
GCCAACAGCC AAGCCTTAGA CACTACTGAC TTAAGCCGTA ATGAAATACG AAAACTCGTC
AGGCAGAGCC GCAACTGCAT CAATCAAGAT GAACAAGAGC AATTAGCCCT TATCGCCAGT
CGCCATATTT TGGCTGAAAT TCAAGCTTCA AATGCCAAGC ATGTGGCCTT GTATCGCGCT
AATGATGGCG AGCTTGCCAC TGATAAACTC ATCGAGACCT TATGGCAAGA AGGGGTCACC
ACCTATCTGC CACGCCTGCA CCCGTTTCGT GAAGGCCAGT TGATCTTCCT GCATTATGAT
AAGCAGACTC AACTTGAAGC CAATCAATTT GGTATTTTAG AGCCAAAACT TGATGTGACT
CAGCTGATGC CAGCCTTTAA GCTGGATGTG ATCTTAACGC CACTGGTGGC GTTTGATATC
CATGGCAACC GCATTGGCAT GGGCGGCGGT TATTATGATC GCTGTTTAGG CGCGTTAACC
CCCCAAGCAT TAGCCTTCGG CCCACCGGCC TTTCAAGCGC TCACGCCACC TATCGCCATC
GGTTTTGCCC ACGATTGCCA GCAAGTGAGC CATATCCCCG TTGAAGCCTG GGATATTCCC
TTGGCGATGA TCATCACCCC CACAAGGCGC ATCACGCCGT AA
|
|---|
| Protein sequence | MNHNAQAQHA IDLMGRVANP TPVMAASDPI SNVAYFSSSA ANSQALDTTD LSRNEIRKLV
RQSRNCINQD EQEQLALIAS RHILAEIQAS NAKHVALYRA NDGELATDKL IETLWQEGVT
TYLPRLHPFR EGQLIFLHYD KQTQLEANQF GILEPKLDVT QLMPAFKLDV ILTPLVAFDI
HGNRIGMGGG YYDRCLGALT PQALAFGPPA FQALTPPIAI GFAHDCQQVS HIPVEAWDIP
LAMIITPTRR ITP
|
|---|
| |