| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0827 |
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| Symbol | |
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| ID | 4017096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 948369 |
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| End bp | 949121 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954818 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_561839 |
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| Protein GI | 91792188 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000371771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA CCCTATTAAT CACTGGCGTT GGCAAGCGAA TAGGTTATGC CCTCGCCAAG
GACTTATTAG CCAAAGGCCA TAGGGTCATA GGCACCTATC GCAGTCATTA CCCCAGTATC
GATGAGTTAG GGCAATTAGG TGCAAGTGTG TACCAATGCG ATTTAACCCA TGAGGCAGCC
TTAGATGAGG TGCTTAACCG CATCAAACAG CAGCATCAAC AGCTCGATGG CATCATACAT
AACGCTTCAG ACTGGCTTGG GGATAATAAC GGCTTAAGCC CAGCTGACAC CATGGCGCGC
ATGATGCAAA TCCATGTTAC GGCGCCCTAT CAGATTAACT TAAGCCTTGC ACCCTTATTA
ACTCAGGCGG CGCTCGGGGC CTCGAGCACA GATAAAAGCG CGGCGATTGG CGCCAGCAAC
ATCATACATA TCACAGATTA TGTGGCAGAG AAGGGCAGTA AGAAGCACAT AGCTTATGCG
GCCAGTAAAG CGGCGCTGCA CAATATGACC TTATCTTTTG CCGCTAAATT CGCGCCAGAA
ATTAAAGTGA ACTCCATTGC CCCAGCGATG ATTCTATTTA ATGAAGGGGA TGATGCAGCT
TATCAAGCCA AGACTTTGGC CAAGGCCATC TTGCCAAAAG AGGCGGGCAC TGAAGAAATT
ATCGCGGTAG TGGATTATTT GCTGGGCAGT CACTATGTCA CTGGCCGCAG CTTCGCCGTG
GATGGCGGCA GACATTTATA CCAATCACAT TAA
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| Protein sequence | MSQTLLITGV GKRIGYALAK DLLAKGHRVI GTYRSHYPSI DELGQLGASV YQCDLTHEAA
LDEVLNRIKQ QHQQLDGIIH NASDWLGDNN GLSPADTMAR MMQIHVTAPY QINLSLAPLL
TQAALGASST DKSAAIGASN IIHITDYVAE KGSKKHIAYA ASKAALHNMT LSFAAKFAPE
IKVNSIAPAM ILFNEGDDAA YQAKTLAKAI LPKEAGTEEI IAVVDYLLGS HYVTGRSFAV
DGGRHLYQSH
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