| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0826 |
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| Symbol | |
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| ID | 4017095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 947352 |
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| End bp | 948287 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954817 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_561838 |
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| Protein GI | 91792187 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000100776 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG CCGTTCTTGG TGCTGCTGGC GGTATTGGCC AGGCATTAGC TTTATTGTTA
AAAACTCAAC TGCCTGCGGG TTCTAAGTTG TCTCTGTATG ATATCGCACC TGTTACTCCA
GGTGTTGCAG TGGACCTAAG CCACATACCA ACAGCCGTTG AAATCAAAGG TTTTGCCGGT
GAAGATCCCA CTCCAGCCCT CGTCGATGCT GATGTAGTGT TAATCTCTGC AGGTGTTGCC
CGTAAGCCGG GTATGGACCG TTCTGATTTA TTCAACATCA ACGCCGGTAT CGTGCGTAAC
CTAATGGAAA AAGTGGCAGC AACTTGCCCT AAAGCCTTAG TGGGTATTAT CACTAACCCA
GTGAACACCA CAGTGGCTAT TGCCGCTGAA GTGATGAAAA AAGCCGGTGT TTACGATAAG
AACCGTTTAT TCGGTGTGAC TACCCTTGAT GTTATCCGCT CTGAAACCTT CATCGCTGAA
TTAAAAGGCC TGAATGTTGC TGACGTGAAC ATCAATGTGA TCGGCGGCCA CAGCGGCGTG
ACTATTCTGC CATTATTGTC TCAAGTTAAG GGCGTAAGCT TCACAGATGA AGAAGTTGCT
GCGTTAACTA AGCGTATCCA GAACGCGGGC ACTGAAGTGG TTGAAGCTAA AGCCGGTGGC
GGCAGCGCAA CTTTATCTAT GGGGCAAGCC GCTTGTCGTT TCGGCCTGTC TTTAGTTCGT
GGTCTTCAAG GTGAAGCGAA CGTGGTTGAA TGTGCCTATG TCGATGGCGG CAGTGAACAC
GCTCAGTTCT TCGCACAGCC CATACTTCTT GGTAAGAATG GCGTTGAAAA AGTCATGCCT
TATGGTGAAG TCAGTGCATT CGAAGCTAAC GCTCGCGATG CCATGTTAGA CACGCTAAAT
GCTGATATCA AACTGGGTGT TGAATTCGTT AAGTAA
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| Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPAGSKL SLYDIAPVTP GVAVDLSHIP TAVEIKGFAG
EDPTPALVDA DVVLISAGVA RKPGMDRSDL FNINAGIVRN LMEKVAATCP KALVGIITNP
VNTTVAIAAE VMKKAGVYDK NRLFGVTTLD VIRSETFIAE LKGLNVADVN INVIGGHSGV
TILPLLSQVK GVSFTDEEVA ALTKRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGLSLVR
GLQGEANVVE CAYVDGGSEH AQFFAQPILL GKNGVEKVMP YGEVSAFEAN ARDAMLDTLN
ADIKLGVEFV K
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