Gene Sden_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0825 
Symbol 
ID4017094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp946603 
End bp947085 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content47% 
IMG OID637954816 
Productarginine repressor 
Protein accessionYP_561837 
Protein GI91792186 
COG category[K] Transcription 
COG ID[COG1438] Arginine repressor 
TIGRFAM ID[TIGR01529] arginine repressor 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00000490161 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC CTATGTCAGC ACCGAAACAA CAGGACGAGC TAGTCAGGAC CTTTAAGGCA 
TTATTAAAGG ACGAAAGCTT CGCCAGTCAA AGCGAAATAG TCACAGCACT ACAAGCCGAA 
GGGTTTGGCA ATATTAACCA GTCTAAAGTC TCCCGCATGC TGAGTAAATT TGGCGCCGTA 
CGCACCCGTA ATGCTAAGCA AGAGATGGTT TACTGCTTAC CTGCAGAGCT TGGCGTTCCC 
ACTGCGGGCA GTCCGGTGAA AAACCTAGTA CTCGATGTTG ATCACAACCA AGCCATGATA 
GTGGTGAGAA CAAGCCCAGG TGCGGCCCAG CTTATTGCCC GTTTATTGGA CTCTATAGGT 
AAACCCGAAG GCATTTTAGG TACCATAGCT GGGGATGACA CCATCTTTAT TTGCCCTGCC 
AGCATTAAAA CCATCGATGA TACCTTGGAA ACCGTTAAGT CATTATTCAA CTATACCGAA 
TAG
 
Protein sequence
MKIPMSAPKQ QDELVRTFKA LLKDESFASQ SEIVTALQAE GFGNINQSKV SRMLSKFGAV 
RTRNAKQEMV YCLPAELGVP TAGSPVKNLV LDVDHNQAMI VVRTSPGAAQ LIARLLDSIG 
KPEGILGTIA GDDTIFICPA SIKTIDDTLE TVKSLFNYTE