| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0824 |
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| Symbol | |
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| ID | 4017093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 944095 |
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| End bp | 946281 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954815 |
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| Product | hypothetical protein |
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| Protein accession | YP_561836 |
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| Protein GI | 91792185 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03549] conserved hypothetical protein TIGR03549 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0307116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA AAGTTAACTT TCTCGACAAT CTTAGACTTG AAGCCAAGTT TGATGATTTC
ACCGTCACCG CCGATCAGCC CATCCGCTAC AAAGGCGATG GTTCAGCGCC TAGCCCCTTT
GATTATTTCC TCGCATCCTC AGCTCTGTGC GCCGCCTATT TCATCAAGGT GTACTGCAAG
GCTAGGGATA TTTCCACTGA AAATATTAAG CTGTCCCAGA ACAACATTGT CGATCCCGAA
GACAGATACA ACCAGATATT CCAAATTCAA GTTGAACTGC CTGATGATAT TTCTGATAAA
GACAGGGAAG GCATACTGCG TTCAATCGAT CGCTGTACAG TGAAAAAAGT GATCCAAACC
GGGCCTGAAT TTAACGTCGA AACCGTTGAA AACTTAAGTG CCGACGCCAA TGCCATGTTA
ATGGGGTCTA GCGACCAAGA CGCCAGTACC TTTATTCTAG GTAAAGACTT ACCCCTAGAG
CAGACCATAG CCAACATGAC CGCCATGCTT GCCGAGCTTG GGATGAAGAT AGAAATATCC
TCATGGCGTA ACATAGTGCC TAATGTCTGG TCGCTGCATA TTCGTGATGC GGCCTCGCCC
ATGTGTTTCA CTAACGGTAA AGGCGCCAGC AAAGAAAGCG CATTATGTTC GGCACTTGGT
GAGTTTATTG AGCGTCTTAA TAATAACTTT TTCTATAATG ATCAATTCTT TGGCACTGAG
ATTGCCAACA GCGAATTTGT TCATTACCCC AATGAAAAAT GGTTCCCATT AGAAGATGAC
GACGCCCTGC CAGCAGGCAT GTTAGATGAC TACTGTTTAG AGATTTACAA TCAAGATGAC
GAGCTTCAAG GCTCGCACCT GATTGATACC AACTCAGGCA ACCGTGAGCG CGGTATTTGC
GCCATTCCTT ATAAGAGAAA ATCTGATGGG CAGACAGTGT ATTTCCCATC AAACCTGATT
GAAAACTTAT TCCTAAGTAA CGGCATGAGC GCGGGTAATA ACCTGCAAGA AGCCGAGGTG
CAGTGCTTAT CGGAAATCTT TGAGCGGGCG GTGAAACGCC AAATTATCGA GCAAGAAATT
GTCCTGCCTG ACGTGCCCAT GAGCGTGCTT GAGAAATACC CTAGCATTTT AGCCGGCATC
AAGGGGTTGG AGGAGCAGGG CTTTCCAATC GTGGTGAAAG ATGCCTCATT GGGCGGGCAA
TTCCCTGTGA TGTGCGTCAC TTTGATGAAT CCAAGAACCG GCGGTGTATT CGCCTCTTTC
GGTGCTCATC CAAGCTTTGA AGTGGCACTA GAGCGCAGCC TGACTGAGTT ATTGCAAGGG
CGCAGCTTTG AAGGCTTAAA CGATGTGCCT AAGCCCACCT TTAACAGCAT GGCGGTGACA
GAACCTGAGA ACTTTGTTGA GCACTTTATC GACTCAACTG GGGTGATTTC GTGGCGATTC
TTTAGCAGCA AGCATGACTA TGATTTCTGC GAATGGGATT TTTCAGGCAC TAGCGAAGAG
GAAGCCAAGG GCTTATTCGC CATCTTAGAA GCCATGGGCA AGGAAGTGTA TATCGCCGAA
TTTACTGAGC TTGGCGCCAG TGCTTGCCGT ATGTTAGTTC CCGATTATTC TGAAGTGTAC
CCAGTGGATG ACCTTATTTG GGACAACACC AATAAAGCGT TACTCTACCG TGAAGACATC
CTAAACCTGC ATTCACTGAG CACTAAAGCC TTGGTGAAGT TAGTCAATCG TTTAGAAGAG
AGCCAGCTGG ATAACCACAC GGATATCCGC ACCTTAATTG GCATCGTATT CGATGAGAAT
ACGGTTTGGG GTAAGCTTAC GATAATCGAG CTTAAGATAA TGATTTATCT TGCACTTGGC
TCACATGAAG ATGCCATAGA GCTGGTGGGC GAATTCCTGC AGTTTAATGA CAATACCGTC
CAGCGGGGCT TGTTCTATCA AGCGGTGAGC GCCGTACTTG AAGTCACCTT AGATGAAGAT
CTCGAGCTTG AGCACTTTAT CGAAAGCTTT AACAGAATGT ATGGCAAAGA CGTCATGGAT
AATGTCGTCG GTTCAGTCAA TGGCACGGTA CGTTTTTATG GCCTCACCAA GACCAGCATG
CAACTTGAAG GCATAGAGCC GCATTTACGC TTGATAGAAA GCTATAAAAA GCTCCATCAA
GCCCGCAAAA TCAAAGCTGG CTTGTAA
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| Protein sequence | MEIKVNFLDN LRLEAKFDDF TVTADQPIRY KGDGSAPSPF DYFLASSALC AAYFIKVYCK
ARDISTENIK LSQNNIVDPE DRYNQIFQIQ VELPDDISDK DREGILRSID RCTVKKVIQT
GPEFNVETVE NLSADANAML MGSSDQDAST FILGKDLPLE QTIANMTAML AELGMKIEIS
SWRNIVPNVW SLHIRDAASP MCFTNGKGAS KESALCSALG EFIERLNNNF FYNDQFFGTE
IANSEFVHYP NEKWFPLEDD DALPAGMLDD YCLEIYNQDD ELQGSHLIDT NSGNRERGIC
AIPYKRKSDG QTVYFPSNLI ENLFLSNGMS AGNNLQEAEV QCLSEIFERA VKRQIIEQEI
VLPDVPMSVL EKYPSILAGI KGLEEQGFPI VVKDASLGGQ FPVMCVTLMN PRTGGVFASF
GAHPSFEVAL ERSLTELLQG RSFEGLNDVP KPTFNSMAVT EPENFVEHFI DSTGVISWRF
FSSKHDYDFC EWDFSGTSEE EAKGLFAILE AMGKEVYIAE FTELGASACR MLVPDYSEVY
PVDDLIWDNT NKALLYREDI LNLHSLSTKA LVKLVNRLEE SQLDNHTDIR TLIGIVFDEN
TVWGKLTIIE LKIMIYLALG SHEDAIELVG EFLQFNDNTV QRGLFYQAVS AVLEVTLDED
LELEHFIESF NRMYGKDVMD NVVGSVNGTV RFYGLTKTSM QLEGIEPHLR LIESYKKLHQ
ARKIKAGL
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