| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0818 |
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| Symbol | |
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| ID | 4017041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 937379 |
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| End bp | 937966 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954802 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_561830 |
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| Protein GI | 91792179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000832673 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA TAAAACTTAT CGTCGGATTG GCTAATCCCG GCGCCGAATA CGCCCAGACT
CGACATAATG CGGGTGCCTG GTATGTGCAT GAATTGGCCC GAGTCTGCAA TGTTACCTTA
GTGCCAGAGA GTAAATATTA CGGTTTGGCG GCGAGAGCCA CGCTACATGG CCGGGATGTA
CGCTTGCTTA TTCCAGCGAC TTTTATGAAT TTAAGCGGCA AGTCAGTGGC GGCATTAGCA
AACTTTTTTC GCATCTTGCC AGAAGAAATC TTAGTGGCTC ATGATGAATT AGACATAGAG
CCTGGGGTTG CCAAATTTAA ACTTGGCGGC GGTCATGGCG GTCACAACGG CCTTAAAGAC
ATCATAGCTC AGATGGGGAA CGATAAAGGC TTTCACCGTT TGCGCATTGG CATAGGCCAT
CCAGGCGACA AGAATAAAGT CAGCGGCTAT GTACTAGGTA AAGCTCCTGC CAGTGAGCAA
GAAAAAATGG ATGCGGCAAT CGATGAGGCC GTGCGCGCCA CTGAAATATT ATTTAAACAA
GACATGGTGA AAGCCATGAA CAGATTACAC AGTTTTAAAG CCGAATAG
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| Protein sequence | MSNIKLIVGL ANPGAEYAQT RHNAGAWYVH ELARVCNVTL VPESKYYGLA ARATLHGRDV
RLLIPATFMN LSGKSVAALA NFFRILPEEI LVAHDELDIE PGVAKFKLGG GHGGHNGLKD
IIAQMGNDKG FHRLRIGIGH PGDKNKVSGY VLGKAPASEQ EKMDAAIDEA VRATEILFKQ
DMVKAMNRLH SFKAE
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