| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0815 |
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| Symbol | |
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| ID | 4017038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 933919 |
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| End bp | 935343 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954799 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_561827 |
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| Protein GI | 91792176 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.518206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AACTACATAT TAAAACCTGG GGCTGCCAAA TGAATGAGTA TGACTCATCC
AAAATGGCGG ATTTGTTAGA CGAATATCAA GGCTACACCT TGACCGACGA TGCAACAGAA
GCAGACGTAT TGCTGCTGAA CACTTGCTCG ATCCGCGAAA AGGCGCAAGA GAAGGTATTC
CACCAGCTTG GTCGCTGGAA AACATTGAAA GATAAAAAGC CAGGTTTAAT CATTGGTGTC
GGTGGCTGTG TGGCGTCTCA AGAAGGCAAA GCCATTAAAG ACCGTGCCCA ATGCGTAGAT
ATCATCTTTG GCCCGCAAAC CTTGCACCGT TTGCCTGAAA TGATAGATCA AGTCCAGCGC
GGCGAAAAAG TCGTTATCGA TGTGAGCTTC CCTGAAATCG AGAAGTTCGA TCGCCTGCCA
GAGCCACGCG CCGACGGCCC AACTGCGTTT GTGTCTATTA TGGAAGGCTG TAGCAAATAC
TGCTCATTCT GTGTAGTGCC ATATACCCGC GGTGAAGAAG TCAGCCGTCC TCAGGATGAT
ATTATTCTTG AAATCGCTCA ACTTGCCGAG CAAGGCGTGC GTGAAGTGAA CCTATTAGGT
CAAAACGTCA ACGCCTACCG CGGTGCAACC CATGACGACC AAATCTGTAC TTTCGCCGAG
TTATTGCGTC TGGTTGCCAG CATTGACGGT ATCGACCGCA TTCGTTTCAC CACCAGTCAC
CCGATTGAAT TTACCCAAGA CATTATCGAT GTCTACGAAG ACACCCCTGA ATTGGTGAGC
TTCCTGCATT TACCGGTTCA ATCAGGCTCA GACAGAATTC TGACTCAGAT GAAACGTGGC
CACATGGCTA TCGAATATAA ATCGATTATC CGTCGTCTGC GTAAGGCCCG CGAAGGCATT
CAAATCAGCT CTGATTTTAT CATCGGCTTC CCAGGTGAAA GCGCTGAAGA CTTCGCCGAC
ACCATGAAAC TGATTGAAGA TGTGGCCTTT GATCACAGCT TTAGCTTTAT CTATTCGGCA
CGCCCAGGCA CACCAGCTGC GGATCTGCCC GATGATGTCA GCGATGAAGA GAAAAAGCAG
CGCCTGGCCA TCTTGCAAGA CCGCATCACT CAACAAGCCA TGCGCTACAG CCGCCAGATG
TTAGGCACAG TGCAGCGTAT TCTGGTTGAA GGCCCCTCGG TTAAAAACCC AATGGAGCTA
CGCGGTCGCA CAGAAAACAA CCGTGTGGTG AATTTTGAAG CGCCGCACAC TCACATCGGC
AGTTTTGTTG ATGTGGAAAT TGTCGACGTA TACACCAACT CACTTCGGGG TATCTTTATC
CGTGGTGAAG CTGAGATGGA TTTACGTCGC AGTTTACGTC CAGCGGATAT CTTGGCTAAA
CATAAGCAAG ATGATGTGTT AGGCGTCACC CAGTTTACCC CATAG
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| Protein sequence | MSKKLHIKTW GCQMNEYDSS KMADLLDEYQ GYTLTDDATE ADVLLLNTCS IREKAQEKVF
HQLGRWKTLK DKKPGLIIGV GGCVASQEGK AIKDRAQCVD IIFGPQTLHR LPEMIDQVQR
GEKVVIDVSF PEIEKFDRLP EPRADGPTAF VSIMEGCSKY CSFCVVPYTR GEEVSRPQDD
IILEIAQLAE QGVREVNLLG QNVNAYRGAT HDDQICTFAE LLRLVASIDG IDRIRFTTSH
PIEFTQDIID VYEDTPELVS FLHLPVQSGS DRILTQMKRG HMAIEYKSII RRLRKAREGI
QISSDFIIGF PGESAEDFAD TMKLIEDVAF DHSFSFIYSA RPGTPAADLP DDVSDEEKKQ
RLAILQDRIT QQAMRYSRQM LGTVQRILVE GPSVKNPMEL RGRTENNRVV NFEAPHTHIG
SFVDVEIVDV YTNSLRGIFI RGEAEMDLRR SLRPADILAK HKQDDVLGVT QFTP
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