| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0793 |
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| Symbol | |
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| ID | 4016957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 911152 |
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| End bp | 911853 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954778 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_561806 |
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| Protein GI | 91792155 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0689585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTAG ATAAATTTGT CTGCAAAAGT ACCCCTTTGT CTCGAACAGA GGCGGTTCAG
GTTATTCATC ATGAAAGAGT GCTGGTCAAC GGGGTGGCGA TAGTCGATGA AGCGGCGCAG
GTGCATGAAA ATAATCACAT TATTCTCGAT GGTAAGCATC TTGTCCCCAG GCCTTTTCGC
TACCTCTTAC TGCATAAACC TGCCAATTGC TTAAGCGCCA ATATCTCTGA ACCTAGCAAG
TCGACAAAGT ACCCCTCGGT GTTCGATGTA TTGAACATAG ATAACAGCAG TGAGCTGCAT
TTAGTTGGTC GATTGGATGC GGATACCACA GGGCTATTAC TCGCCACCGA TGATGGTCGC
TGGTCATTTA CTATCACAAG TCCCAACTCT GATTGCAGCA AAGTGTACCG GGTTGGGCTT
GCTAAACCCC TAGGGCCAGA GGTTGCCGAT AAGTTTTTAG CGGGGATCTT ATTGCAAGGG
GAACACGAGC TTACCTTGCC CGCCAAACTT GAAGTTATTT CGCCTAACCA AGTGTTATTG
ACTCTGACTC AGGGAAAGTT TCATCAAGTA AAACGTATGT TTGCCGCCGT GGGGAATAAG
GTGGTGTCGC TGCATAGAGA GAAAATTGGC GCTATCAGTT TGGATGTGCC CCAAGGGCAG
TGGCGCGCAC TAACAGAGGC TGAAGTTAAC GCCATGGGCT AA
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| Protein sequence | MRLDKFVCKS TPLSRTEAVQ VIHHERVLVN GVAIVDEAAQ VHENNHIILD GKHLVPRPFR
YLLLHKPANC LSANISEPSK STKYPSVFDV LNIDNSSELH LVGRLDADTT GLLLATDDGR
WSFTITSPNS DCSKVYRVGL AKPLGPEVAD KFLAGILLQG EHELTLPAKL EVISPNQVLL
TLTQGKFHQV KRMFAAVGNK VVSLHREKIG AISLDVPQGQ WRALTEAEVN AMG
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