| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0790 |
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| Symbol | |
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| ID | 4016954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 907591 |
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| End bp | 909663 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954775 |
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| Product | TonB-dependent haem/haemoglobin receptor |
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| Protein accession | YP_561803 |
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| Protein GI | 91792152 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000110471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA AACCATTAGT GATAGCCGTG ACCTTTGCTA TCTTCAACGC TACTAGTGTT
GGCGCTTATG CCGCTAACAA TCAAGCTGTC ACTGAGCTAG AAGAAGTGCT GGTCAATGCC
ACTCGTATCG ATGAGAGCCT AGCTAAGTCG AGCCGCGCCA TTGTTAAAAT CTCAGCAGCC
CAGCTTGAAG AGTCACAACC ATCATCGGCT GCCCAAGCGC TAAAGCATGA GGCCAATATC
ACAGTCACTA ATGGTCCACG TCCATCGGCC CAAGGGGTTG AAATTCGTGG GTTAAGCGGT
AACCGCGTGT TGCAAACTGT GGATGATGCG CGCCAGAATG CGGGTTCAGG TCACAGAGGG
ACTTATTTCA TCGATCCTGA AATGCTTAAG TCCATTGAAG TGCTAAAGGG GCCTTCAAGC
AGCTTGTGGG GCAGTGGTGC GATTGGCGGT GTGGTGGCGC AATACACTAA GTCGGCGCAA
GACTTTCTTG AGGACGGTGA GCATTTTGGT GGCTATCTAA AGCAAGGCTA TGAAACCAAT
GGCTCGCGCA CTAAAACCAG TGGCAGCATT TACGGTGTGC AGGACAGCAT TGATTGGCTT
GTCAATGGCA GCTACCTTGA CAGCAATAAT ATCAAAATTG GCAAGGATGA GAGCTTAAAT
AACAGCGCAT CACAAGGTCA CAGCGCGTTA GGTAAGTTAG GCTGGCAATT GGATGATGCT
CAGCGTTTGG AGCTGTCTTT AAGAAGTAAC AATAGCAATG AGTTAGTGCC AAGTAACCCA
AGTGCCGAAG TCAGCCGCTC TGTGCCATTA GTGCGCCGCG AAACCACGGA CAACAACCTA
AGCTTGGTTT ACGAGCTTAA CCCAAGTGAT AACGCTTATT TAGATGCTAA GGCATTAATT
TACGTTAACC AAACAGATTA TGATGAAAAT AGGGTCACTA AGGGGCAGAT AGATGCCACA
GAATTTAATA CCTTAGGATT AAGTCTAAGT AATAAGTCAA TTTTTGGCGC AGGCCTTGGC
CGCACCGAAT TAGTCTATGG CGTAGATGGT TATAAAGACA CCATTGAAAC TGTACGTGAC
GATAAAGGTC AAACGGGTCA GCGTCCGGGC AATATTGATG GCGAAGTCAG TACCTTAGGG
GTGTTTGTTG TCGGTAAAGT TAGCCTAAGC GATACAGTAT CGGTAGAGCC TGCGCTACGT
TATGACAGCT TTAGCAACCA GAGCAATAAC CTAGGGTTAG AAACTGACGA TAGCGCCGTG
TCGCCATCAT TGGCATTGGT GTGGCAGAGT ACCCCTTGGT TAAATTTGAG TGCCCGTTAC
GATCAAGCAT TTCGCGCCCC AAGCATAGAA GAAATGTACT CAAGTGGCAG CCATTACTGT
ATCCCGCCTA TTCCGCGCTT CTTGCCAAAC GGCATGTGCA ATACCTTCGC TATTAATCCC
GATTTGAAAG CGGAAAAAGC GAAAAACAAG GAGCTTAAAG CCGATTTTAG CTTCAGTGAG
CTTAGTGCTA CTGGCGCCGA TGACGAGCTA AACCTGACCT TAAGTGTGTT CCGTAACGAT
GTGGATGACT TTATTGTTCA GAGCGTCAGC AATCCATTGA TGGGTATTCC AGGTTTTGAG
CAAACTACCT CGTGGAATAA CGTGAGTTCA GCTGAATTAA CGGGTTTTGA GATTTCCAGC
CGCTACCGTT ATAACCAGAC GCGTTTAAGC GTCAACTACG GTCAAACTCA AGGTAAAGAC
GCTGATACCA ATGAATATAT TGCGAATATT CCGGCCAACA AGCTGAGCCT AGATTTATCT
CAAGGCATCA TGGAGGGCGA TGTTAAGTTA GGGACTCGCT TAAGCTATGT CGCAAGCCAA
ACGGATGTGC CTCTTGATAA CAACGTGGCC CAATATGATG ACTACAAATT GTGGGACGTC
TATGTGGCAT GGGAGCCATC AATGGGTGAT TTAGCCGGCC TTCGTGTTGA TTTTGCTATT
GAAAACATCG GTGACGAGCA ATACAAGCAA GCGTGGCAAA CCTTGTTCGA ACAAGGGCGA
AACATGAAGT TATCCGCCCG CTACCAGTTT TAA
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| Protein sequence | MNKKPLVIAV TFAIFNATSV GAYAANNQAV TELEEVLVNA TRIDESLAKS SRAIVKISAA
QLEESQPSSA AQALKHEANI TVTNGPRPSA QGVEIRGLSG NRVLQTVDDA RQNAGSGHRG
TYFIDPEMLK SIEVLKGPSS SLWGSGAIGG VVAQYTKSAQ DFLEDGEHFG GYLKQGYETN
GSRTKTSGSI YGVQDSIDWL VNGSYLDSNN IKIGKDESLN NSASQGHSAL GKLGWQLDDA
QRLELSLRSN NSNELVPSNP SAEVSRSVPL VRRETTDNNL SLVYELNPSD NAYLDAKALI
YVNQTDYDEN RVTKGQIDAT EFNTLGLSLS NKSIFGAGLG RTELVYGVDG YKDTIETVRD
DKGQTGQRPG NIDGEVSTLG VFVVGKVSLS DTVSVEPALR YDSFSNQSNN LGLETDDSAV
SPSLALVWQS TPWLNLSARY DQAFRAPSIE EMYSSGSHYC IPPIPRFLPN GMCNTFAINP
DLKAEKAKNK ELKADFSFSE LSATGADDEL NLTLSVFRND VDDFIVQSVS NPLMGIPGFE
QTTSWNNVSS AELTGFEISS RYRYNQTRLS VNYGQTQGKD ADTNEYIANI PANKLSLDLS
QGIMEGDVKL GTRLSYVASQ TDVPLDNNVA QYDDYKLWDV YVAWEPSMGD LAGLRVDFAI
ENIGDEQYKQ AWQTLFEQGR NMKLSARYQF
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