| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0786 |
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| Symbol | |
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| ID | 4016736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 904380 |
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| End bp | 905363 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954771 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_561799 |
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| Protein GI | 91792148 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.683071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTC AAACTATTTT TTGCAGAAAA TTAACCTTTT CGGATAAAGC TTTCGCGATA
AGAGCATTAA TCATAACAAT GGGCACGACA ATCATATTTA GCGCCAGTTA TGCTTTAGCA
AATGTGACAT CAGCTTCCGC TAAAAAACCG GTTAATCTCC CTGAAACCAA GCAAACCCGT
CTTGTTAGCG CAGGCGCTGG AGTCACTGAA CTCATACTCG CCCTAGGCGC CGCGCCGCAA
TTAGTGGGGA TAGATTCCAC CAGCCAAATA CCAGCAAAAC TTGCCCCTTC AATGACTCAA
GTGCAGCGGC TTGGCTACCA CAGAATGTTG TCAGCCGAAG GCATTATTGG CCTTAATCCT
AGCCATGTGA TTGGCTCTGA GGTCATGGGT CCAGAAAGCA GTTTACACTT ACTGACTCAA
GCAAATATTC ACGTCATCAA GCTCAATAGC GCCACCACTG AGCAGCAATT AATGGACAAC
ATTGACAGCT TAAGTGAGAT TGTTGGCAAG CCAAGCTCGG CCCTTGAGCT TAAGCGCACA
CTCAAACAGC AGCTCGCTCA AATCGCGGAT AAGCGTAGCC AACTGACGAG TAAACCTAAG
GTGCTGTTTT TATTACTTCA AGAAGGAAGG CCCGCCAGAG TGGGCGGTAA AGATACCGCA
GCAGATCTTA TTATTACCCT TGCTGGCGGC GCCAATGCAG CAGACTTTGA TAGCTACAAA
AGCGTCTCTG GGGAAGGCAT ATTAGCCCTT AATCCTGAGG TAATTTTATT GTCCCATCGC
AGTGAGCAAA GCATGCAGGC GACAGCAGCG CTGTTTGATG AGGTCACTAA ACAAATTCCT
TTAGTTGCAC ACACCAAAGC GGGCCAGCAG CAGGCTTTTA TTAACTTGAA ACCTGAAGCC
TTGATTGGCG GCTTGGGCTT ATCCGCCATT GATGCAGCTG ACACTTTAGT GCAGCAGTTT
TTAGTGACTC AAGAGATAAA ATAG
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| Protein sequence | MTSQTIFCRK LTFSDKAFAI RALIITMGTT IIFSASYALA NVTSASAKKP VNLPETKQTR
LVSAGAGVTE LILALGAAPQ LVGIDSTSQI PAKLAPSMTQ VQRLGYHRML SAEGIIGLNP
SHVIGSEVMG PESSLHLLTQ ANIHVIKLNS ATTEQQLMDN IDSLSEIVGK PSSALELKRT
LKQQLAQIAD KRSQLTSKPK VLFLLLQEGR PARVGGKDTA ADLIITLAGG ANAADFDSYK
SVSGEGILAL NPEVILLSHR SEQSMQATAA LFDEVTKQIP LVAHTKAGQQ QAFINLKPEA
LIGGLGLSAI DAADTLVQQF LVTQEIK
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