| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0781 |
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| Symbol | |
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| ID | 4016731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 900105 |
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| End bp | 900923 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954766 |
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| Product | extradiol ring-cleavage dioxygenase III subunit B |
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| Protein accession | YP_561794 |
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| Protein GI | 91792143 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGA AAAACCTCAA CATAGCGTTT ATTTCCCATG GTGGCGGCCC TATGCCGCTG
CTCAATGACC CAAGCCATGC CGAGCTTGTG AACTACTTAA CAGGGCTTGC CAGTAAACTC
GATAAACCCA GCGCGATTTT GCTTATCAGC GCACATTGGG AAGCAGCGGT GGCCACCATC
ACCGCCAGCC CCACACCTCA GATGATCTAC GACTATCGGG GGTTTCCAGC AGCAGCCTAT
GAATTGCAAT ACCCAAGCCC TGGCTCGCCA ATACTGGCAA AGAAAGTACA GCAGGCCTTA
AAAGATGCTG GTATTGCAGT AAAGCTAGAT AGTCAGCGTG GCTATGATCA TGGTCTATAT
GTGCCTTTGA CCTTAATGTA TCCAAAGGCG GATATTCCCA CCATTCAATT GTCATTAATC
AATGATCTAG ATCCTGAGCA GCACCTAGCA ATAGGGCGCG CATTGCAGGC ATTGAATGTT
GATAACCTCT TAGTCATAGG TTCTGGGTTT TCTTTCCATA ATATGGGAGA GTTTTTTGCC
CCTAATACCC AAGAGCGTCA GCTGAAAAAC CAAGAATTCG AACATTGGCT GCAGCATACG
CTGAGTGACA AACAGCTAAA TGAAACCGAT CGCCATGACC TGCTGCAACA TTGGGCTCAC
GCGCCACATG CTCGTTATTG CCATCCGAGG GAAGAACACC TTTTACCGCT GCATATTTGC
TATGGCCTGG CAGGCAGAGC CAGTGATGAG CATCAAAGTC TTACGATTAT GAACAAGCAC
TCGAGTTCAT TTGTCTGGTA CAAAAGCGAG CAAAGTTAA
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| Protein sequence | MNMKNLNIAF ISHGGGPMPL LNDPSHAELV NYLTGLASKL DKPSAILLIS AHWEAAVATI
TASPTPQMIY DYRGFPAAAY ELQYPSPGSP ILAKKVQQAL KDAGIAVKLD SQRGYDHGLY
VPLTLMYPKA DIPTIQLSLI NDLDPEQHLA IGRALQALNV DNLLVIGSGF SFHNMGEFFA
PNTQERQLKN QEFEHWLQHT LSDKQLNETD RHDLLQHWAH APHARYCHPR EEHLLPLHIC
YGLAGRASDE HQSLTIMNKH SSSFVWYKSE QS
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