| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0771 |
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| Symbol | |
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| ID | 4016721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 890969 |
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| End bp | 892366 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954756 |
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| Product | major facilitator transporter |
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| Protein accession | YP_561784 |
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| Protein GI | 91792133 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00332718 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAT TTATTAGTGC CTCCATCGAT GCCCTGCGTG TTTATTATCA TAAACGTGTG
CTTATCTTAC TGTTACTTGG CTTCTCCGCT GGCTTACCGC TCATGCTGGT CTTTTCAACC
TTGAGCTTTT GGCTGCGAGA AGCAGGCGTC GATAGGGCTG CTATCGGCTA TTTCAGCTGG
ATTGCCTTAG CCTATGCCTT CAAATGGGTC TGGTCCCCCT TAGTAGACAG AATGTCCTTG
CCTTTGCTCA CCCGCTGGCT AGGCAGGCGC CGCGCTTGGA TGCTGTTGGC GCAAATATTA
CTGGTACTGG CGATTTTGGG CATGTCGGTT AGCGATCCCT TAGAAGATTT AGACAAGCTC
GTTCTGTTCG CCTTGATGCT GGCTTTCGCC TCGGCCACTC AAGATATTGT CATCGACGCG
TTTAGAATCG AGTCTGCCCC AGAGAAAATG CAAGCCGCAC TCGCCGCCGC TTATCAAGTG
GGCTATCGCA GTGCCATGAT AGTTGCCACC GCAGGTGCGC TCACCATAGC CGCTTGGGTG
CAACCTGGCG ATGACAGCTA CAACCTTGAA GCCTGGCAGA CAGCCTACAC CATTATGGCG
GCCTTAATGG GGGTTGGTAT ACTCACCACT CTTTTCAGCC GAGAACCTGT GGTGGATACC
AAGGAAGCCG ATGCCACTGA AGATGCCATG AGGCAAAGCT TAAGCGAAAA TTACCCCAAA
CCTGTCGCGG CGGCAATGTC ATGGGTTTAC ACTGCTAGCG TACTGCCATT TTTGGACTTT
TTTAAACGCT ACGGCAAGAG CGCCATACTG ATTTTATTGC TGATTTCATG TTATCGCATT
TCAGATATTG TCATGGGGAT CATGGCTAAT GTGTTTTATG TAGACATGGG ATTTAGCAAG
GAAGAAATCG CCTTTATCAG TAAAGTTTAT GGGTTAATCA TGACCTTAGT GGGCGCGGCA
TTTGGCGGGG TACTATTAGC TCGCTATGGC ACCATAAAAA TTCTTTTCCT AGGTGCCTTA
CTGGTGGCGC TAACCAATTT ATTGTTCGCC TGGCAAGCTG TGGTCGGTTA TGACGTGACT
TTGCTAACCT TAGTGATTTC CATCGATAAC TTCAGCGCAG GTATCGCCAC CGCGGCCTTT
ATTGCTTACC TTTCAAGCCT GACAAGCTCG GGCTATAGCG CCACCCAGTA CGCACTGCTT
TCATCGATTA TGTTGCTATT CCCTAAATTT ATTGCAGGAT TTTCAGGGGA ATATGTGGAT
GCTTTTGGCT ATGTAAACTT CTTTATCGCC GCCAGTATCA TAGGCTTGCC CGTGTTAATC
TTGATCGCCT TGTTGCAGCG AAAGAATGGC CAAATTGCCG CACTTGCAGC CAAGGAAGCA
AAAGCTGACG TTGAGTAG
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| Protein sequence | MTQFISASID ALRVYYHKRV LILLLLGFSA GLPLMLVFST LSFWLREAGV DRAAIGYFSW
IALAYAFKWV WSPLVDRMSL PLLTRWLGRR RAWMLLAQIL LVLAILGMSV SDPLEDLDKL
VLFALMLAFA SATQDIVIDA FRIESAPEKM QAALAAAYQV GYRSAMIVAT AGALTIAAWV
QPGDDSYNLE AWQTAYTIMA ALMGVGILTT LFSREPVVDT KEADATEDAM RQSLSENYPK
PVAAAMSWVY TASVLPFLDF FKRYGKSAIL ILLLISCYRI SDIVMGIMAN VFYVDMGFSK
EEIAFISKVY GLIMTLVGAA FGGVLLARYG TIKILFLGAL LVALTNLLFA WQAVVGYDVT
LLTLVISIDN FSAGIATAAF IAYLSSLTSS GYSATQYALL SSIMLLFPKF IAGFSGEYVD
AFGYVNFFIA ASIIGLPVLI LIALLQRKNG QIAALAAKEA KADVE
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