| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0768 |
|---|
| Symbol | |
|---|
| ID | 4016607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 888839 |
|---|
| End bp | 889813 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637954753 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_561781 |
|---|
| Protein GI | 91792130 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000150905 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCT CTGCCGAGGA CGTTCTCCAA AACACAGCGA ATATCGCCGT ACTCGGTGTC
GGCGCTGTCG GCCAGCTAAT TTGCCATCAA TTAACAGCAA AAGCGGCCAA GGTACTGTTA
TTAACCCGTG ACGTCAGTGG CCCGCAAACT CTGACATGCC AGCCCCTTAT GGACGCAAGT
GCAACAAGCT GCGTGCCTGA TAGTGTTACA CATCAATACC CAAGCCTAAT CACGACTAAT
CTCACGGCTG AACACCTAGC TCATATTCGC CTCTTGATTG TCACCACTAA GGCTTATCAG
GTGGTGGCGT TACTCACGCC ATTACTGGCA AAGCTCAGAG CCGATTGTCA CATTCTATTA
CTGCATAATG GCATGGGGCC TCACTTAGCA TTAAGTGTTC TGCTTGCTCA ACATCCTGCA
ATGGGGTTGA GTTTAGGCAC CACATCACAA GGGGCGATGC GGCTATCACA ATGGCAGATT
AAGCATACAG GAACAGGGTT AACTCAGCTT GGACATGGCT TTGGCGCCGT TATTAACGAC
AATTATCGCG CCTTGCTGTT GGATGCCATT CCCGATAGCC ATTGGCAAGA TGACATTATC
ACTAGTCTAT GGCAAAAGCT TGCCATCAAT TGTGCCATCA ATCCACTTAC CGCCATCCAT
CAATGCCAAA ATGGCGCGCT AGCTGCACCT CAACATCAAG ACACCATAAG CCAGTTATTA
CTCGAGCTCA TTCCTGTGGC TAAGGCCCAA GGGGTTAAGC TTGAGTTGGA TAATCTGCTT
GAAAAGGTTA ATCAGGTTAT TCATCTCACG GCGCAAAACT ACTCTTCCAT GTACCAAGAC
ATTACTCATC ATAGGCCTAC GGAAATAGCA CAAATCAATG GCTACGTGAG CCAATGTGCC
CAAGAGTATG GCCTGAAAAC GCCTTTGCAC CACGCTATAC TTGCCAGCAT CAAATCACTT
GAAGCTCAGG ATTAA
|
|---|
| Protein sequence | MTPSAEDVLQ NTANIAVLGV GAVGQLICHQ LTAKAAKVLL LTRDVSGPQT LTCQPLMDAS
ATSCVPDSVT HQYPSLITTN LTAEHLAHIR LLIVTTKAYQ VVALLTPLLA KLRADCHILL
LHNGMGPHLA LSVLLAQHPA MGLSLGTTSQ GAMRLSQWQI KHTGTGLTQL GHGFGAVIND
NYRALLLDAI PDSHWQDDII TSLWQKLAIN CAINPLTAIH QCQNGALAAP QHQDTISQLL
LELIPVAKAQ GVKLELDNLL EKVNQVIHLT AQNYSSMYQD ITHHRPTEIA QINGYVSQCA
QEYGLKTPLH HAILASIKSL EAQD
|
|---|
| |