| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0765 |
|---|
| Symbol | |
|---|
| ID | 4016604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 885436 |
|---|
| End bp | 886335 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637954750 |
|---|
| Product | LysR, substrate-binding |
|---|
| Protein accession | YP_561778 |
|---|
| Protein GI | 91792127 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.960601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATAAAC TACGTGGGAT GCAACTCTTT GTCCGCTTAG CCGATTTAGG CAGTTTTACT
CGCGTCGCCG AGCAAACCAA TAGCTCTAAA TCCATGGTAA GTAAGGAAAT CAGCCGATTA
GAGGCCGACT TAGGCGCCCG TTTATTGCAT CGTTCTACCC GAAATGTGCA ATTAACCCCT
GTGGGGGAAG GTTACTTAGT GCGTGCTAGA GAGATACTGG CAAAACTTGC TGACGCCGAG
AGCTTTGCCC AAGATCAGCA GTTGAATTTA CGGGGAAAGC TTAAAATAAA TGCCCCTATG
GCCCTGGGCA TTACCGACTT GTCTAGCCTA TTTGCCGATT TCATGCAGGC CCACCCAGAG
ATAGAACTCG ACATTCACTT AGGGGATGAA AGCATTGATC TGGTAGAGCA AGGGTTTGAT
CTTGGTTTTC GCGCCTCGAG TACCCCCATA GATTCTAATT ATGTGGGCAG AGCGCTAACG
GCTTTTACCT ATCGAGTTTG TGCCTCTCCT GACTACCTAA AACAGCACCC TAGTATTGAT
TCACCTGAAG ATCTGCAAGC GCATAACTGT TTTGTATACA GCTATTTTCA TGGAAAAAAT
ATCTGGCCAA TTGAAGATGG GGTGGCAGTG AAAGGCAATT TACAGGTGAA TAGCACCCTA
TTTATGATGG AGTCGATTAA GAAGGGCCTT GGACTCGGCT TTATTCCTGA TTTTGTCTGT
CAGCAGGCAA TCGACAGCGG CCAAGTGGTT GAAGTATTAG CCGATGCAAA AAAACCTAAG
CTCACGCTCT ATGCCTTATA TCCAGCGCGA CATTTTGTCC CAGCCAAGTT AGTAGAATGC
ATTGAATATT TAACTCTTTG GTTTGCTAAT AAAAAATTAC TCCAAATGCA TAAGCGCTAA
|
|---|
| Protein sequence | MDKLRGMQLF VRLADLGSFT RVAEQTNSSK SMVSKEISRL EADLGARLLH RSTRNVQLTP
VGEGYLVRAR EILAKLADAE SFAQDQQLNL RGKLKINAPM ALGITDLSSL FADFMQAHPE
IELDIHLGDE SIDLVEQGFD LGFRASSTPI DSNYVGRALT AFTYRVCASP DYLKQHPSID
SPEDLQAHNC FVYSYFHGKN IWPIEDGVAV KGNLQVNSTL FMMESIKKGL GLGFIPDFVC
QQAIDSGQVV EVLADAKKPK LTLYALYPAR HFVPAKLVEC IEYLTLWFAN KKLLQMHKR
|
|---|
| |