| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0754 |
|---|
| Symbol | |
|---|
| ID | 4016593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 876866 |
|---|
| End bp | 877906 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637954739 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_561767 |
|---|
| Protein GI | 91792116 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATC AACGCATTGC CCATTCAAGC CTTGAAGTCA GTAAAATTTG CCTAGGTACC
ATGACCTGGG GAGAACAAAA CACCCAAGCA GAAGCGTTCG CTCAACTGGA TTACGCCATA
GGTCAAGGCG TTAACTTTAT CGATACCGCC GAAATGTACC CTGTGCCGCC CAAAGCCGAT
ACCCAAGGAG AGACTGAGCG CATACTTGGG CGTTATCTCA AAGCACAAGG CAATCGAGAT
GAGCTGATTA TCGCCACTAA AGTCGCCGCA CCTGGGGGAA AGGGTGACTA TATTCGCCCC
AATATGGCAC TGGATTGGCG CAACATACAT CAAGCTGTGG ATGATTCCCT CAACCGATTG
CAAATCGACA CCATAGACCT GTATCAGGTG CATTGGCCCG ATCGTAACAC TAACTTCTTC
GGCGAAATGA TGTATGAGCA TCAAGCAGAT GAACAATACA CCCCCATCTT AGATACCTTA
GAGGCGTTAA GTGAAATCGT TCGCCAAGGC AAGGTGCGTT ACATAGGGAT CTCTAACGAA
ACCCCCTGGG GGTTTATGAA GTATTTAAAG CTGGCTGAAA AGCACGATTT GCCGCGCATC
GTCAGCGTGC AAAACCCCTA CAACCTGCTC AATCGTAGCT ATGAAATTGC CATGGCAGAG
ATAAGCCACA GGGAGGAAGT GCCATTATTG GCTTACTCGC CCCTGGCCTT TGGCGCGCTG
ACAGGCAAGT ATGAAAAGGG CCAATGGCCC GAAGGGGCTC GTCTCACTGT ATTTAAACGT
TTCGCCCGTT ACAACAGTAC CCCTATGGCA TTAGAGGCGA CCCAAGCTTA TGTGGATCTC
GCGCGGGAGT TTGGCCTGTC ACCGGCGCAA ATGGCATTAG CCTTCGTTAA TAGCCGTAAA
TTTGTCGCAT CCAACATCAT AGGGGCCACT GACTTGCATC AACTAAAAGA GAACATCGAC
AGTCATAAAC TCAGCTTGTC TAACGAGCTA ATCGCACGCA TTAATGAGTT ATCTAGCCTT
TATCGCTTTC CCTGCCCTTA A
|
|---|
| Protein sequence | MEYQRIAHSS LEVSKICLGT MTWGEQNTQA EAFAQLDYAI GQGVNFIDTA EMYPVPPKAD
TQGETERILG RYLKAQGNRD ELIIATKVAA PGGKGDYIRP NMALDWRNIH QAVDDSLNRL
QIDTIDLYQV HWPDRNTNFF GEMMYEHQAD EQYTPILDTL EALSEIVRQG KVRYIGISNE
TPWGFMKYLK LAEKHDLPRI VSVQNPYNLL NRSYEIAMAE ISHREEVPLL AYSPLAFGAL
TGKYEKGQWP EGARLTVFKR FARYNSTPMA LEATQAYVDL AREFGLSPAQ MALAFVNSRK
FVASNIIGAT DLHQLKENID SHKLSLSNEL IARINELSSL YRFPCP
|
|---|
| |