| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0741 |
|---|
| Symbol | |
|---|
| ID | 4016847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 860030 |
|---|
| End bp | 860431 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637954726 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_561754 |
|---|
| Protein GI | 91792103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000832007 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAT TGATTGAACA ACTACAGGCC TTAAATGAGC CTGTACCTGT GCCGTTAGAA
TTGGCAAGTT TCGAGCAATT GGTGGAGGTA GAAGAGCAAA TTTTGATCTC CTTACCGCGG
GAATTAAAAG TCTACCTAAT GGAAGCCAGC GATGTTGTCT ATGGCCATAT TGAGCCTGTG
ACCGCAAGCG ATCCTCAGTC TCACACCTAT TTACCCGAGG TCACCTGTTA CGCTTGGTCT
ATCGGCTTAC CCAGAGAGCT GATTGCCATT TGCCAACAAG GCGATAACTT CTACTGTATC
GATCAGGATG GACAAGTTCA TTTTTGGAAA AATGGCCGCT TCGTTGGTGA AGTGTTTGAA
TCATTCTGGC ATTGGGTCGA CCGTGTTTGG CTTAATAACT AA
|
|---|
| Protein sequence | MHELIEQLQA LNEPVPVPLE LASFEQLVEV EEQILISLPR ELKVYLMEAS DVVYGHIEPV
TASDPQSHTY LPEVTCYAWS IGLPRELIAI CQQGDNFYCI DQDGQVHFWK NGRFVGEVFE
SFWHWVDRVW LNN
|
|---|
| |