Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0726 |
Symbol | |
ID | 4016641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 839341 |
End bp | 841344 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954711 |
Product | peptidase U32 |
Protein accession | YP_561739 |
Protein GI | 91792088 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATCGG TTGAAATTTT TACGCCAACT AAGATAACTC AAACCCCAGT TGACCCTAAG GGGACCGCCG CTGTTAGTGC AAACAGGCTT GCCAGCGCGA CCAATGCAGC AACCCTGCCT AAGCGTCAAT TAGAGCTGTT AGCCCCCGCT AAAAATGCTG ATTACGGTAT TGAAGCCATA CGTCACGGCG CCGATGCGGT TTATATCGGC GGGCCAGCTT TTGGCGCCCG ACACAACGCT GGTAACAGTG TCGAAGATAT CAAACGGTTG ACGGCATTCG CTCACAGCTA TCACGCTCAA GTGTTTGTTG CCCTCAATAC CATCTTGATG GATAGCGAGA TAGATAAGGC TCAAGCATTG ATTTGGGACT TGTACCATGC CGGTGTCGAT GCCTTGATCA TCCAAGACAT GGGCGTATTG CAACTCGAAC TACCCCCCAT TGCCTTGCAT GCCAGTACTC AAATGGATAA CCGAACCCCA GAGAAAGCGA TATTTTTAGA GCAGGTGGGG TTTTCTCAGG TGGTATTAGC CCGTGAGCTT AATATTCCGC AAATTCGTGA TATTGCCGCT AGCACTAAGA TGAAGCTTGA ATTTTTCATC CATGGCGCTC TGTGCGTGAG TTATTCAGGC TTATGCAACT TAAGCCATGC CTATTCAAAT CGCAGTGCAA ACCGCGGTGA ATGCTCACAG ATGTGTCGTC TGCCATGCAA TCTTACTACC CGCGATGGCG ACGTGTTGGC TGAAAACCAG CATTTGTTGT CTTTAAAAGA TAATAACCAG ACAGATAACT TAGAAGCCTT GATTGATGCG GGCGTGAGCT CATTTAAAAT TGAAGGCCGT TTAAAAGACA TTACCTACCT TAAAAACGTC ACCGCACACT ATCGCCAGCA GCTGGATGCC ATTATCGCCA AGCGTGACGA TCTTGAGTCT ATCTCTCACG GCAGTTGTGA ATTTAACTTC AACCCAGATC CCGATAAAAG CTTTAATCGC GGTAAAACCG ACTACTTTGT GAATGAGCGT ACCGAAGCCA TCGAGCATTT TAGCTCGCCT AAATTTATCG GTGAGAAAGT GGGCCGCATT ACTAAAGTGG GCAAAGACTC TGTCACTGTG GATACCAGCG AAAGCGGTAA AGATATCCAG TTTAATAATG GCGACGGCTT GTGTTTCTTC GTTGAGCAGT TCGAAAAACA AAGGTTATCC GATGATAAAT TATCAGGTCT TAGGGTGAAC CGCGCCGAAG GAAATATTCT GCATTTAACT GAGGTGCCGA AAGATTTAAA AGTGGGCGTG GTGCTGTACC GTAATTTTGA TCATAAATTT GAAGCGACAT TAAACAAAGA ATCGGCTAAG CGTAAAATTA GTGTCGATAT GCAGTTGTTT GATACCGATA GCGGCGTTGG CCTTAGCATG AGTGATATGC ATGGTCATAG TGTCACTGTG ACGCTCGCGT GTGCAAAGGA AGCGGCAAAT GATCAAGCCA AAGCCGCTGA AAATATTAAC AAGCAGCTGG GGAAACTTGG CAGCAGTGAT TTTGTGCTCA ATAAACTTAA CCTTAAATTG ACACAGATGT GGTTCTTGCC AGCTTCTGCG CTCAATGAGC TGCGCCGTGA TGCCATTGAG GCGCTGATGA CTGTGCGTCT CGAGTCATAT CAACGTCCAG AGCGTTGGCA GCATGACAAA AGTGCACGCT TCCCGCAAAA AGCATTAAGC TTCTTATCCA ATGTGGCCAA TGAGAAAGCC AAGTCTTTTT ATGAGCAGCA TGGGGTGATC CAGATTGAAG ACACCTACGA AAAGAACAAG GTTTTACATG ATGCACCTTT AATGGTGACT AAGCATTGCC TGAGATACAG TTTTAATCTT TGTCCTAAGG AAGTTGAAGG CATCAAGGCC GACCCCATGT TTTTAGACGT AGGTAAAGAT AAGCTTAAGC TAGTGTTTGA CTGCCAAAAA TGCGAAATGA TGATCGTTGG CACCAATCAG CAGGTCAAGC AAGTGAATCA ATAA
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Protein sequence | MPSVEIFTPT KITQTPVDPK GTAAVSANRL ASATNAATLP KRQLELLAPA KNADYGIEAI RHGADAVYIG GPAFGARHNA GNSVEDIKRL TAFAHSYHAQ VFVALNTILM DSEIDKAQAL IWDLYHAGVD ALIIQDMGVL QLELPPIALH ASTQMDNRTP EKAIFLEQVG FSQVVLAREL NIPQIRDIAA STKMKLEFFI HGALCVSYSG LCNLSHAYSN RSANRGECSQ MCRLPCNLTT RDGDVLAENQ HLLSLKDNNQ TDNLEALIDA GVSSFKIEGR LKDITYLKNV TAHYRQQLDA IIAKRDDLES ISHGSCEFNF NPDPDKSFNR GKTDYFVNER TEAIEHFSSP KFIGEKVGRI TKVGKDSVTV DTSESGKDIQ FNNGDGLCFF VEQFEKQRLS DDKLSGLRVN RAEGNILHLT EVPKDLKVGV VLYRNFDHKF EATLNKESAK RKISVDMQLF DTDSGVGLSM SDMHGHSVTV TLACAKEAAN DQAKAAENIN KQLGKLGSSD FVLNKLNLKL TQMWFLPASA LNELRRDAIE ALMTVRLESY QRPERWQHDK SARFPQKALS FLSNVANEKA KSFYEQHGVI QIEDTYEKNK VLHDAPLMVT KHCLRYSFNL CPKEVEGIKA DPMFLDVGKD KLKLVFDCQK CEMMIVGTNQ QVKQVNQ
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