| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0726 |
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| Symbol | |
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| ID | 4016641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 839341 |
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| End bp | 841344 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954711 |
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| Product | peptidase U32 |
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| Protein accession | YP_561739 |
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| Protein GI | 91792088 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCGG TTGAAATTTT TACGCCAACT AAGATAACTC AAACCCCAGT TGACCCTAAG
GGGACCGCCG CTGTTAGTGC AAACAGGCTT GCCAGCGCGA CCAATGCAGC AACCCTGCCT
AAGCGTCAAT TAGAGCTGTT AGCCCCCGCT AAAAATGCTG ATTACGGTAT TGAAGCCATA
CGTCACGGCG CCGATGCGGT TTATATCGGC GGGCCAGCTT TTGGCGCCCG ACACAACGCT
GGTAACAGTG TCGAAGATAT CAAACGGTTG ACGGCATTCG CTCACAGCTA TCACGCTCAA
GTGTTTGTTG CCCTCAATAC CATCTTGATG GATAGCGAGA TAGATAAGGC TCAAGCATTG
ATTTGGGACT TGTACCATGC CGGTGTCGAT GCCTTGATCA TCCAAGACAT GGGCGTATTG
CAACTCGAAC TACCCCCCAT TGCCTTGCAT GCCAGTACTC AAATGGATAA CCGAACCCCA
GAGAAAGCGA TATTTTTAGA GCAGGTGGGG TTTTCTCAGG TGGTATTAGC CCGTGAGCTT
AATATTCCGC AAATTCGTGA TATTGCCGCT AGCACTAAGA TGAAGCTTGA ATTTTTCATC
CATGGCGCTC TGTGCGTGAG TTATTCAGGC TTATGCAACT TAAGCCATGC CTATTCAAAT
CGCAGTGCAA ACCGCGGTGA ATGCTCACAG ATGTGTCGTC TGCCATGCAA TCTTACTACC
CGCGATGGCG ACGTGTTGGC TGAAAACCAG CATTTGTTGT CTTTAAAAGA TAATAACCAG
ACAGATAACT TAGAAGCCTT GATTGATGCG GGCGTGAGCT CATTTAAAAT TGAAGGCCGT
TTAAAAGACA TTACCTACCT TAAAAACGTC ACCGCACACT ATCGCCAGCA GCTGGATGCC
ATTATCGCCA AGCGTGACGA TCTTGAGTCT ATCTCTCACG GCAGTTGTGA ATTTAACTTC
AACCCAGATC CCGATAAAAG CTTTAATCGC GGTAAAACCG ACTACTTTGT GAATGAGCGT
ACCGAAGCCA TCGAGCATTT TAGCTCGCCT AAATTTATCG GTGAGAAAGT GGGCCGCATT
ACTAAAGTGG GCAAAGACTC TGTCACTGTG GATACCAGCG AAAGCGGTAA AGATATCCAG
TTTAATAATG GCGACGGCTT GTGTTTCTTC GTTGAGCAGT TCGAAAAACA AAGGTTATCC
GATGATAAAT TATCAGGTCT TAGGGTGAAC CGCGCCGAAG GAAATATTCT GCATTTAACT
GAGGTGCCGA AAGATTTAAA AGTGGGCGTG GTGCTGTACC GTAATTTTGA TCATAAATTT
GAAGCGACAT TAAACAAAGA ATCGGCTAAG CGTAAAATTA GTGTCGATAT GCAGTTGTTT
GATACCGATA GCGGCGTTGG CCTTAGCATG AGTGATATGC ATGGTCATAG TGTCACTGTG
ACGCTCGCGT GTGCAAAGGA AGCGGCAAAT GATCAAGCCA AAGCCGCTGA AAATATTAAC
AAGCAGCTGG GGAAACTTGG CAGCAGTGAT TTTGTGCTCA ATAAACTTAA CCTTAAATTG
ACACAGATGT GGTTCTTGCC AGCTTCTGCG CTCAATGAGC TGCGCCGTGA TGCCATTGAG
GCGCTGATGA CTGTGCGTCT CGAGTCATAT CAACGTCCAG AGCGTTGGCA GCATGACAAA
AGTGCACGCT TCCCGCAAAA AGCATTAAGC TTCTTATCCA ATGTGGCCAA TGAGAAAGCC
AAGTCTTTTT ATGAGCAGCA TGGGGTGATC CAGATTGAAG ACACCTACGA AAAGAACAAG
GTTTTACATG ATGCACCTTT AATGGTGACT AAGCATTGCC TGAGATACAG TTTTAATCTT
TGTCCTAAGG AAGTTGAAGG CATCAAGGCC GACCCCATGT TTTTAGACGT AGGTAAAGAT
AAGCTTAAGC TAGTGTTTGA CTGCCAAAAA TGCGAAATGA TGATCGTTGG CACCAATCAG
CAGGTCAAGC AAGTGAATCA ATAA
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| Protein sequence | MPSVEIFTPT KITQTPVDPK GTAAVSANRL ASATNAATLP KRQLELLAPA KNADYGIEAI
RHGADAVYIG GPAFGARHNA GNSVEDIKRL TAFAHSYHAQ VFVALNTILM DSEIDKAQAL
IWDLYHAGVD ALIIQDMGVL QLELPPIALH ASTQMDNRTP EKAIFLEQVG FSQVVLAREL
NIPQIRDIAA STKMKLEFFI HGALCVSYSG LCNLSHAYSN RSANRGECSQ MCRLPCNLTT
RDGDVLAENQ HLLSLKDNNQ TDNLEALIDA GVSSFKIEGR LKDITYLKNV TAHYRQQLDA
IIAKRDDLES ISHGSCEFNF NPDPDKSFNR GKTDYFVNER TEAIEHFSSP KFIGEKVGRI
TKVGKDSVTV DTSESGKDIQ FNNGDGLCFF VEQFEKQRLS DDKLSGLRVN RAEGNILHLT
EVPKDLKVGV VLYRNFDHKF EATLNKESAK RKISVDMQLF DTDSGVGLSM SDMHGHSVTV
TLACAKEAAN DQAKAAENIN KQLGKLGSSD FVLNKLNLKL TQMWFLPASA LNELRRDAIE
ALMTVRLESY QRPERWQHDK SARFPQKALS FLSNVANEKA KSFYEQHGVI QIEDTYEKNK
VLHDAPLMVT KHCLRYSFNL CPKEVEGIKA DPMFLDVGKD KLKLVFDCQK CEMMIVGTNQ
QVKQVNQ
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