Gene Sden_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0713 
Symbol 
ID4016914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp824165 
End bp824770 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID637954698 
Producttranscriptional regulator BetI 
Protein accessionYP_561726 
Protein GI91792075 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID[TIGR03384] transcriptional repressor BetI 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0124161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAC CAGAAATGAA ATCCCTAAGG CAAAAGCAGT TGATTGAGGC CACCTTAGAA 
TCTGTGGCAA AACATGGGTT ACACCATACG ACCATTAATA CCATTAGCGG TTTAGCGGGT 
ATGTCATCTG GGATCATCAG CCATTATTTT GGTGGCAAGC AGGGGCTAAT TGAGGCGACT 
CAGCGGCATT TACTCGAACA GTTAAAGCAG GCGCTGTTGA TGCGCGTCAG TGGACACTCC 
CTAACCCCTA AGCAAAGATT GATGATGATA GTGGAAGCAA ACTTTACTGA GTTACAACGC 
TCAACCCCGG CCACTAAGAC TTGGTTGAGT TTTTGGTCTC AGGCCATGCA TGAGCCAGGC 
CTTGCTCGTT TGCAAAATAT TAATAGCCAG CGCTTGTACC GTAATTTGCG TTTTTCTTTC 
AGGCAGCTCC TTAACGATGA GCAAGCCACA AACGCGGCAA AACAAGCGGC AGCCATGATC 
GATGGATTTT GGTTACGCAG TGCCTTGAGC CAAACGCCAG AATTGGCTTT CGCCCAAGCC 
GAACATTTAT GTAAAGCATT TATAGAGACG CTAGTTTCTA CACCTGGAGA AAATACATGT 
CAGTAG
 
Protein sequence
MARPEMKSLR QKQLIEATLE SVAKHGLHHT TINTISGLAG MSSGIISHYF GGKQGLIEAT 
QRHLLEQLKQ ALLMRVSGHS LTPKQRLMMI VEANFTELQR STPATKTWLS FWSQAMHEPG 
LARLQNINSQ RLYRNLRFSF RQLLNDEQAT NAAKQAAAMI DGFWLRSALS QTPELAFAQA 
EHLCKAFIET LVSTPGENTC Q