Gene Sden_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0690 
Symbol 
ID4016773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp798861 
End bp799442 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content45% 
IMG OID637954675 
ProductSH3, type 3 
Protein accessionYP_561703 
Protein GI91792052 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000000176512 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAGAT TACTTTCAAT AATAACGCTA TTATTCGTCT CAAATGGATT GATGGCGCAG 
GAGCCAACGC ATTTTATTAC CGATGATGTC TATGTCTATA TTCATGGTGG TCCAGGTAAT 
CAATACCGCA TCATAGGTAG CGTTGAGGCT GGTCAAGCTG TCACCTCACT CAACGAAACT 
CAAGACGATT ATGCCAAAAT CATCGACCAC AAAGGTCGTG AAGGTTGGGT AAAGTCAGAG 
CTTATTACCA CCACCAAAAG CATTCGCGAA CGCCTGCCGG ATCTTCAAGA AGTGATAAGC 
AAAGCTAAAG ACGAGCTGCA ACAGATGACC CAGACCCAAG CAACCACTGC TATCGCTCTT 
GATGATGCCA ATAAGCGTAT TTCTCAGCTT AAGCAATTAT TAGCCAAGAC TGAAGCACAA 
CGAGATACTA TCAAGCAAAA AGTCGAGTCG GTTGAAGACA AGCAAATGTT TGCCATGTGG 
CAGCAAGGTG GCATGATCGC GGGTATTGGT GCGCTGATCG GCATCATTTT AGTCTACTTA 
CCTCGTCCGA GTGGCCGTAA GAAAAACCGT TGGATGTCAT AA
 
Protein sequence
MLRLLSIITL LFVSNGLMAQ EPTHFITDDV YVYIHGGPGN QYRIIGSVEA GQAVTSLNET 
QDDYAKIIDH KGREGWVKSE LITTTKSIRE RLPDLQEVIS KAKDELQQMT QTQATTAIAL 
DDANKRISQL KQLLAKTEAQ RDTIKQKVES VEDKQMFAMW QQGGMIAGIG ALIGIILVYL 
PRPSGRKKNR WMS