Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0689 |
Symbol | |
ID | 4016772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 795353 |
End bp | 798547 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954674 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_561702 |
Protein GI | 91792051 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000102631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCA TTATGATGTT CAAAGCGAGT GAAGTATTGG CCGGCCGCTA TGACGATGCC ACTCTTGACC AACTTTTCCA AGCCGTGACC GACAACTATA TTGTCGATGA AGAAGCTTAT CTCACAGAGC TTATCAAGCT TGTGCCTTCC ACTGATGAGC AAATTGAGCA GGTGACTCAA CGCGCCCATG ATTTAGTCAG TAAGGTGCGT AAGTTTGAGA AAAAAGGCTT AATGATTGGC GTCGATGCTT TCTTGCAGCA ATATAGCCTG GAAACTCACG AAGGCATTAT CCTTATGTGC CTGGCTGAGG CCCTACTGCG TATACCTGAT GCGGAAACTG CCGATGCCCT TATCGAAGAT AAGCTTTCAG GTGCCAAATG GGATGCTCAC TTAAAACAGA GTGACTCTGT GTTAGTGAAT GCCTCGACTT GGGGACTCAT GCTCACGGGT AAAATCATCA AGCTAGATAA AAAGCTCGAT GGCACCCCGA GCAACTTACT TAAGCGCTTA GTCAATCGCT TAGGTGAGCC AGTTATTCGC CAGGCCATGT ACGCTGCCAT GAAAATCATG GGCAAGCAAT TTGTCTTGGG CCGCAATGTA AAAGAAGCCC TCAATAACAG TGAAGCTAAG CGCAGTTTAG GCTACACCCA CAGCTACGAT ATGCTCGGTG AAGCCGCACT CACGGACAAG GATGCCAAGA AATATTTCAA TGATTATAGC AACGCCATTA AAGAACTTGG CGCTCAAAGC TATGATGAAA ATGAATCACC GCGTCCGACT ATCTCAATTA AGCTTTCGGC TCTGCATCCA AGGTATGAAG TCGCCAACGA AGGCCGAGTA TTAACTGAGC TTTACGCCAC AGTTATCAAG CTGATTGTGC AGGCTCGTGA GCTTAACATT GGCATTTCAA TCGATGCCGA AGAAGTGGAT AGACTGGAAC TTTCCCTTAA ACTATTCAAA AAACTATTTA ACTCAGTAGA ATCCCAAGGC TGGAATTTAC TCGGCATAGT GGTGCAAGCT TACTCTAAAC GCGCACTACC TGTACTGTGC TGGTTGACCC GCCTTGCCAA AGAGCAAGGG GATGAAATCC CAGTACGTTT AGTCAAAGGC GCTTACTGGG ACAGTGAACT TAAATGGGCG CAGCAAGCAG GTGAAGCAGG CTACCCACTA TTTACCCGTA AAGCGGGCAC TGACGTGTCC TACCTTGCCT GTGCACGCTT CTTATTGTCT GACGCCACTC GCGCTGCCAT CTATCCGCAA TTTGCGACTC ATAATGCGCA AACTGTGGCC AGCATAGATG CCATGGCAAC GGATAGGAAC TACGAGTTTC AACGTTTGCA CGGCATGGGC CAAGAGCTCT ATGACACGAT TTTGGCTGAA AGCGGTGCCA AGACAGTGCG GATCTACGCC CCCATTGGTG CCCATAAGGA ACTATTGCCT TACTTGGTTC GTCGTCTGCT AGAAAACGGG GCTAACACCT CATTCGTGCA CAAGCTGGTT GACCCTAAAA CCCCTATCGC TTCGTTAGTG GTTCATCCTC TGGTCACCTT GCAAGCCTAC AAAAGCCTTG CTAATAAAAA CATCGCTTTA CCCGCCGATA TTTTTGGCGC TGAACGTAAA AATTCTAAGG GATTAAATAT GAATATCTTG TCTGAAGCTC AGCCATTTTT CGCCGCCATA GATAAATTCA ATGACACTCA GTGGCAAGCA GGCCCACTGG TAGACGGTAA AACCTTAACC GGTGATATTA ATACTGTCGT CAGCCCCTAT GATACCAAGC AGACTGTGGG CCAAGTGGTG TTCGCCGATC AACAAGCCAT AGAGCAGGCG CTAGCCTCTG CCAGTCACGC CTTCCCTAGT TGGGCCCGTA CTCCGGTAGA AACCCGCGCC AGCGCGCTGC AAAAACTTGC CGACCTATTG GAAGAGAACC GCGAAGAGCT GATTGCACTT TGTACCCGTG AAGCCGGTAA GAGTATTCAG GACGGTATAG ATGAAGTCCG TGAAGCCGTG GATTTCTGTC GCTACTACGC CGTTCAAGCC AAGAAGCTTA TGGGTCAACC TGAGCTACTC CCAGGCCCAA CGGGTGAGCT TAACGAGTTA TTCCTTCAAG GCCGCGGTGT ATTTGTCTGT ATCAGCCCAT GGAACTTCCC ATTGGCGATA TTTTTAGGCC AAGTATCGGC GGCATTAGCT GCCGGTAACA CTGTCGTTGC TAAGCCTGCG GAGCAAACCT CACTCATAGG TTATCGCGCT GTGCAGCTGG CTCACCAGGC AGGTATTCCG GTTGAAGTGC TGCAATACCT GCCTGGTACA GGTGCAACCG TAGGTTCAGC CATCACAGCC GATGAGCGCA TTGGCGGTGT GTGCTTTACT GGCTCGACAG GCACAGCCAA ACTCATTAAC CGCACCTTAG CAAACCGTGA TGGCGCGATT ATTCCTTTGA TTGCCGAAAC CGGTGGTCAA AATGCCATGG TGGTCGACTC AACCTCACAG CCTGAGCAAG TGGTTAACGA TGTAGTTTCA TCTTCATTCA CCAGTGCTGG CCAACGCTGC TCGGCGCTGC GGGTGTTATT CTTGCAAGAA GATATCGCCG ACAGAGTCAT AGAAGTGATG CAAGGCGCCA TGGAGCAGCT TGCTATTGGT CACCCTGGCA AGGTGCAAAC CGATGTCGGT CCTGTGATTG ACGCAACAGC TAAAGCGAAC TTAAATGCGC ATATCGATCA CATCAAGCAA GTGGGCAAGC TTATCAAGCA AATTCAACTA CCAGCCGGCA CTGAAGATGG TCACTTTGTC GCGCCAATCG CGGTTGAAAT TGACTCAATC AAGGTGTTAG AAAAAGAACA CTTCGGCCCA ATATTGCATG TTATCCGCTA CAAGGCCGCT GATTTAAGTA AAGTGATTGA TGAAATCAAC AGCACAGGCT TTGGCTTAAC CTTAGGTATT CATAGCCGTA ACGAAGGTCA CGCGCTTAAT TTGGCTGACA AAGTGAATGT TGGTAACGTC TACATCAACC GTAACCAAAT TGGCGCCGTG GTTGGGGTAC AGCCATTCGG GGGTCAAGGC CTATCTGGCA CGGGTCCTAA AGCGGGCGGT CCTCACTATT TGACCCGTTT TGTAACCGAG AAAACGCGCA CTAACAACAT CACCGCCATT GGTGGTAATG CGACCCTATT GTCATTAGGC GATAGCGACG AGTAA
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Protein sequence | METIMMFKAS EVLAGRYDDA TLDQLFQAVT DNYIVDEEAY LTELIKLVPS TDEQIEQVTQ RAHDLVSKVR KFEKKGLMIG VDAFLQQYSL ETHEGIILMC LAEALLRIPD AETADALIED KLSGAKWDAH LKQSDSVLVN ASTWGLMLTG KIIKLDKKLD GTPSNLLKRL VNRLGEPVIR QAMYAAMKIM GKQFVLGRNV KEALNNSEAK RSLGYTHSYD MLGEAALTDK DAKKYFNDYS NAIKELGAQS YDENESPRPT ISIKLSALHP RYEVANEGRV LTELYATVIK LIVQARELNI GISIDAEEVD RLELSLKLFK KLFNSVESQG WNLLGIVVQA YSKRALPVLC WLTRLAKEQG DEIPVRLVKG AYWDSELKWA QQAGEAGYPL FTRKAGTDVS YLACARFLLS DATRAAIYPQ FATHNAQTVA SIDAMATDRN YEFQRLHGMG QELYDTILAE SGAKTVRIYA PIGAHKELLP YLVRRLLENG ANTSFVHKLV DPKTPIASLV VHPLVTLQAY KSLANKNIAL PADIFGAERK NSKGLNMNIL SEAQPFFAAI DKFNDTQWQA GPLVDGKTLT GDINTVVSPY DTKQTVGQVV FADQQAIEQA LASASHAFPS WARTPVETRA SALQKLADLL EENREELIAL CTREAGKSIQ DGIDEVREAV DFCRYYAVQA KKLMGQPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI FLGQVSAALA AGNTVVAKPA EQTSLIGYRA VQLAHQAGIP VEVLQYLPGT GATVGSAITA DERIGGVCFT GSTGTAKLIN RTLANRDGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS SSFTSAGQRC SALRVLFLQE DIADRVIEVM QGAMEQLAIG HPGKVQTDVG PVIDATAKAN LNAHIDHIKQ VGKLIKQIQL PAGTEDGHFV APIAVEIDSI KVLEKEHFGP ILHVIRYKAA DLSKVIDEIN STGFGLTLGI HSRNEGHALN LADKVNVGNV YINRNQIGAV VGVQPFGGQG LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DSDE
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