Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0668 |
Symbol | |
ID | 4016945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 769485 |
End bp | 770477 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637954653 |
Product | hypothetical protein |
Protein accession | YP_561681 |
Protein GI | 91792030 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAC CGCAGCTTAA AGCCCAGCGC CTGCCCTTCG CCATAGGCGC CTTCATTCTT GGGGCCATAC TACTGATTTT TACGGCGTTA TTGTTCTTCT CCGGCGGGCG GTTATTCGCC GAGAAAGAAC CCATCATAAT GTATTTTGAT GGATCAGTGC AGGGGCTACA AGTGGGGGCA GCCGTCAAGC TCAAGGGGGT CATCATTGGC GAAATCAGCG ATATCCGCAT CGATTTCCCC AGCGACAGCA GCCAAAAAGT CACCGCAGCC GTGAGTGCAA ATCTACTCTT GGAGCGAATA AAACTTAAAG GTATTCAAGT TGATGCTGAT TTTTTTAGCC GAGCAATCGA CAAAGGGTTA CGGGCACAGC TAAATTTTCA GAGCCTACTC ACCGGGCTTT TGTATGTAGA GCTGGATTTC TATCCCGACA CCCCGATTCT GTTAAGGGGT GAGCAAGACA ATGTATTAGA GCTGCCCACC ATAGCCACGG GGTTTGAGCT GTTTACTCAA GATTTTCAGT CCATCGACTT TAAAGGCTTA GTCGATAACG TAGATAAGTT GGCTCAAGAG CTCAGTGATA TTGCCAGTAG TGGCCAAATT CAGCGTACCT TAACGAGTTT TGATACTGCA GCCAAAGCCG TTGAAACCAC GGCCAATCAA TTTAACCATA CCCAAGCAAG CTTAGAGAAA AATGCCCAAG TGGTGCTAAC ACGCTTAGAT AAACTGCTAC TGCAACTCAG CCAGGATGAA CCTAAACTGC TGCAGTCTGT GCAAACAAGC CTTACAGAAT TACGTAATAC CTTAATGAGC CTAGATAAAC TCGCCATCGA GGCGACTGGC ACCTTAGGTC AAGGATCGCC ACTGGTTATT CAGCTTAACA ATACCCTCAA GGAAGTCAGT CGCTCGGCGC GCGCCTTAAG AAGCCTAAGT GAAACCTTAG ACGAGCAGCC AGAATCTTTG CTGCGCGGTA AACGCTTATC TGATGAGGAA TAA
|
Protein sequence | MNKPQLKAQR LPFAIGAFIL GAILLIFTAL LFFSGGRLFA EKEPIIMYFD GSVQGLQVGA AVKLKGVIIG EISDIRIDFP SDSSQKVTAA VSANLLLERI KLKGIQVDAD FFSRAIDKGL RAQLNFQSLL TGLLYVELDF YPDTPILLRG EQDNVLELPT IATGFELFTQ DFQSIDFKGL VDNVDKLAQE LSDIASSGQI QRTLTSFDTA AKAVETTANQ FNHTQASLEK NAQVVLTRLD KLLLQLSQDE PKLLQSVQTS LTELRNTLMS LDKLAIEATG TLGQGSPLVI QLNNTLKEVS RSARALRSLS ETLDEQPESL LRGKRLSDEE
|
| |