| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0656 |
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| Symbol | |
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| ID | 4016685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 757000 |
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| End bp | 758394 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954641 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_561669 |
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| Protein GI | 91792018 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGTAC ATATATTAGG AATTTGTGGC ACTTTCATGG GCGGTCTCGC CTTACTCGCC
AGAGCCATGG GCCACAAAGT GACCGGCAGT GATGCCAATG TTTACCCGCC AATGAGTACT
CAATTGCTAG AGCAAGGCAT TGAACTTATT CAAGGTTTTG ACCCCTCCCA ATTGGGTGAC
AGTGATGAGA ATGCCCCTGA TCTAGTGGTT ATCGGCAATG CCATGAGTCG TGGAAACCCC
TGTGTGGAAG CCGTGCTCAA CCGCGGTCTT AAGTACACCT CAGGACCGCA ATTTTTGGCC
GAGCACATAC TCCCAGGTCG TTGGGTGCTG GCGGTATCTG GCACCCATGG CAAGACCTCT
ACCTCGAGCA TGCTGGCTTG GATCTTAGAA TACTCTGGCT ACGAGCCCGG TTTCTTGATT
GGTGGTGTGC CGCAAAATTT CGGTGTATCT GCAAGGCTTG GCAATTCAAA TTTCTTTGTG
GTGGAAGCCG ATGAATATGA CAGCGCCTTC TTCGATAAAC GCTCCAAATT CGTGCACTAC
CAGCCAAGAA CCTTAGTCAT TAATAATCTT GAATTCGATC ACGCCGATAT TTTCGATGAC
TTAACCGCCA TTCAGCGCCA ATTTAACCAT GTTATCCGCA CTGTGCCAGG GCAAGGTAAA
ATCATTTGGC CAGCCAACAG TGAAGCCGTT CAGCAAGTGA TTGAAATGGG CTGCTGGAGT
GAGCAAGAGA CTTACAGTGC TGGGGTGCAT GACTTCAACA CAGAAAAAAC CTTGGGCTGG
CATGCAAAAA CCTTAAGCGC CGATGCCCAT GAATTTGAAG TCTATTTCGA CGGCCACAGC
CAAGGCGTGA TGAGCTGGAA TTTAATCGGC CAACACAATG TAGAAAATGC GGTAATGGCC
ATAGCGGCAG CGCGCCATGT GGGCGTAGTG CCAGCCCAAG CCATGGCGGC CCTCAGTGAG
TTTTCCCCAC CAAAACGTCG CCTCGAATTA TTAGGTACTA TAGGCGGAGT GGCGGTATTT
GATGATTTCG CCCACCACCC TACCGCCATA GATAGCACCT TACAGGGACT CAGAGCCAAA
GTGGGTAACG GTAAAATCAC TGTGGTGCTG GAGCCTCGCT CAAACACTAT GAAGCAAGGC
GTGCATAAAG ACACCTTAGC CCATTCATTA GTTCGCGCCG ACCAAGCCTA TTTATACCAA
GCTGACAGCA TCAGCTGGGA TCTTAAATCC AGCATGCAAA CCGCCAGTAT TCCTGTGAGT
GTAAAAACCG ATATAGAGCA GATAATCGAC GCCCTTTGCC ATGATGCCAA AGCCGGTGAC
ACTATCGTTA TCATGAGCAA TGGCGGCTTT AATGGCATAC ATAAAAAGCT GCTTGAAGCC
TTGGCGGATA GATAA
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| Protein sequence | MHVHILGICG TFMGGLALLA RAMGHKVTGS DANVYPPMST QLLEQGIELI QGFDPSQLGD
SDENAPDLVV IGNAMSRGNP CVEAVLNRGL KYTSGPQFLA EHILPGRWVL AVSGTHGKTS
TSSMLAWILE YSGYEPGFLI GGVPQNFGVS ARLGNSNFFV VEADEYDSAF FDKRSKFVHY
QPRTLVINNL EFDHADIFDD LTAIQRQFNH VIRTVPGQGK IIWPANSEAV QQVIEMGCWS
EQETYSAGVH DFNTEKTLGW HAKTLSADAH EFEVYFDGHS QGVMSWNLIG QHNVENAVMA
IAAARHVGVV PAQAMAALSE FSPPKRRLEL LGTIGGVAVF DDFAHHPTAI DSTLQGLRAK
VGNGKITVVL EPRSNTMKQG VHKDTLAHSL VRADQAYLYQ ADSISWDLKS SMQTASIPVS
VKTDIEQIID ALCHDAKAGD TIVIMSNGGF NGIHKKLLEA LADR
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