Gene Sden_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0649 
Symbol 
ID4016678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp749784 
End bp751154 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content50% 
IMG OID637954634 
Productamino acid carrier protein 
Protein accessionYP_561662 
Protein GI91792011 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCA TTACAGAATT TATAAGTACA ATCAATGGCA TAGTTTGGGG TGTTCCCATG 
CTGGTAATGA TCTTAGGGGT GGGGCTATTC TTGTCCATCG GCCTTAGGTT AATGCCCATC
TTAAAATTAG GTCGCGGTTT CAAGTTGTTA TGGTCTGGCC GAGCAGTGTC AGAGGATGCC
GATAAGGGCG AAATTAGCCC ATTTAATGCC TTGATGACCT CACTGTCTGC CACCATAGGC
ACAGGTAATA TTGCCGGTGT GGCGACCGCC ATTTTTATCG GTGGCCCAGG CGCCTTGTTT
TGGATGTGGT GTACTGCGCT TGTAGGCATG GCGACCAAGT ATTCTGAGGC CGTGCTCGCG
GTTAAGTTTC GTGAGAAAGA CACAGAGGGT AACCATGTCG GTGGCCCCAT GTACTATATC
AAAAATGGTT TAGGCAAAAA ATGGGCATGG CTTGGCACTG CTTTTGCGCT GTTTGGCTCA
ATAGCTGGCT TTGGGATCGG CAATACAGTG CAAGCCAATT CTGTGGCTGA CGCCATGAGC
AGCAATTTTG GTGTGCCCGC TTGGGTCACT GGAGCGGTGT TGATGCTGCT GGTTGGCGCC
GTATTAATGG GCGGCATTAA ACGTATCGCC GAAGTGGCAG GCAAACTGGT GCCACTGATG
ACAGTGTTTT ATATCACAGC AGGGCTTGCG GTATTAATCG TTTACGCAGA ACAAGTGCCA
GATGCCTTTA TGTTGATTAT CCACAGTGCC TTTAATCCGG TGGCAGCCCA AGGCGGTTTC
GCTGGGGCTG CGGTATGGGC GGCAATTCGC TTTGGTGTGG CTCGTGGGGT GTTTTCCAAT
GAAGCGGGCC TAGGTAGCGC GCCCATTGCC CACGCGGCGG CGCAAACTAA CGATCCGGTC
AAGCAAGGTT TAGTCGCCAT GCTGGGCACC TTTATCGACA CCCTTATTGT CTGCACCATT
ACCGGTCTTG CCATTGTGGT TTCTGGGGCG TGGACATCGG GGGAGAATGG CGCAGCGTTA
ACCTCCTTTG CCTTCTCTCA TGCATTGCCT ATGGGTAACT ACATAGTGGC CATTGCCTTG
GCCGTATTTG CCTTTACCAC CATCTTAGGC TGGAGTTTTT ACAGCGAAAA GTGCGTCCAG
TATCTCTTGG GAGACAAGGC CATTAAGCCG TTTCGATTAA TCTGGACCTT AGTGGTGCCA
TTAGGGGCGA TGAGCTCCCT TGAGTTTATT TGGTTATTGG CAGATACCTT AAATGCCATG
ATGGCCATCC CCAACTTAAC GGCCTTAGTA TTATTAAGCC CAGTCGTGTT TGGCTTAACT
CGAGAATACT TTATAAAACA AAGGCAGCTC GCGGCCAATA AAGTCGATTG A
 
Protein sequence
MEAITEFIST INGIVWGVPM LVMILGVGLF LSIGLRLMPI LKLGRGFKLL WSGRAVSEDA 
DKGEISPFNA LMTSLSATIG TGNIAGVATA IFIGGPGALF WMWCTALVGM ATKYSEAVLA
VKFREKDTEG NHVGGPMYYI KNGLGKKWAW LGTAFALFGS IAGFGIGNTV QANSVADAMS
SNFGVPAWVT GAVLMLLVGA VLMGGIKRIA EVAGKLVPLM TVFYITAGLA VLIVYAEQVP
DAFMLIIHSA FNPVAAQGGF AGAAVWAAIR FGVARGVFSN EAGLGSAPIA HAAAQTNDPV
KQGLVAMLGT FIDTLIVCTI TGLAIVVSGA WTSGENGAAL TSFAFSHALP MGNYIVAIAL
AVFAFTTILG WSFYSEKCVQ YLLGDKAIKP FRLIWTLVVP LGAMSSLEFI WLLADTLNAM
MAIPNLTALV LLSPVVFGLT REYFIKQRQL AANKVD