| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0617 |
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| Symbol | |
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| ID | 4017031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 704831 |
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| End bp | 706318 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954602 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_561630 |
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| Protein GI | 91791979 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAC TGGTGAGCAC TATTAATGGG GTGATTTGGA GCCCTGCATT GATTTTCCTC
TGTTTAGGGG TGGGGTTATA TTTCACAATT CGTAGCCGTT TTGTGCAGTT ACGTCACGTG
CCTGAGATGG TGCGCTTGAT ATTTGATGGC AAGAGTAACG CAGCGGGTGT TTCTTCATTT
CAAGCCCTAG CCATGACTTT GGCTGGCCGT GTCGGTACGG GTAACATAGC CGGGGTGGCG
ACAGCCATTA CTTTCGGCGG CCCTGGTGCC TTGTTTTGGA TGTGGATGGT GGCCTTCTTT
GGCGCCAGTT CAGCGTTTGT GGAATCGACG TTAGGTCAAA TCTATAAAGA AAAAATTGAT
GGTGAGTTTC GCGGCGGCCC AGCGTTTTAT ATTGAAAAGG GCTTAGGGAT GAAATGGTAC
GCATGGATTT TTGCGGTGGC GACCATTTTT GCCTGCGGTA TTTTACTTCC AGGTGTGCAA
GCCAATTCAA TCGGCTCAGC ATTAGAAACG GCCTTTGATT TAAGCCCGGC AGTGACAGCG
GCTCTAATAG CCTTATTGCT TGGCTTTATT ATTTTTGGTG GTGTTAAGCG TATCGCCCAT
TTTGCCAGTG CGGTAGTGCC TTTTATGGCG CTGGGTTACA TCATAGTGGC CTGCGTTATC
ATAGGCATGC ATATAGAACA GCTTCCTGAT GTCATTATCT TGGTGGTTAA GAGTGCCTTT
GGTTTAGAAG CAGGTTTTGG CGCCATCTTA GGTCTGGCTA TTATGTGGGG GGTTAAGCGC
GGTATATATT CTAACGAAGC AGGTCAAGGT ACAGCGCCTC ACGCCTCTTC TGCAGCAGCC
GTGAGTCATC CCGCCAAGCA AGGCCTAGTA CAGGCGTTCT CTGTGTATAT CGATACCTTG
TTTGTGTGTT CTGCAACGGG TTTTATGTTG TTGATTACGG GGCTTTATAA TGTTCAGGGG
CCAGAAGGTG AGGCGATATT TACCGGTATT GCCGGAATAG CCGCAGGACC TGGTTACGTG
CAGACTGCGA TGGAAAGCAT GATGCCAGGT TTTGGCAATA TGTTTGTGGC GATAGCCTTA
TTCTTCTTTG CCTTTACCAC CATCATTGCT TACTACTATA TTGCCGAAAC CAATATTGCT
TATATTAATC GTCAGGTGCA CCGCCCTTGG TTAACCTTAC TGCTTAAGTT TGCCTTAATT
GCGGCCACTG TGTACGGCAC TGTCAAAACC GCCGATCTTG CATGGGGTTT AGGTGACATA
GGTGTCGGCC TGATGGCGTG GCTTAACATA GTCGCCATTT TACTTCTGCA TAATAAAGCC
TTTGCTTGCC TTAAAGATTA TGAAGCGCAA AAAGCCCAAG GCTTAGATCC CGTCTTCGAC
CCTGAAGCCA TGGGGATTGA AAATGCTGAT TTTTGGGTAG AACGTAAGAA ACAGCATCAA
GCAATCGCGG ATGAAGCCGC CAAAGCACAA GCTAGCAATA CGCCGTAA
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| Protein sequence | MDQLVSTING VIWSPALIFL CLGVGLYFTI RSRFVQLRHV PEMVRLIFDG KSNAAGVSSF
QALAMTLAGR VGTGNIAGVA TAITFGGPGA LFWMWMVAFF GASSAFVEST LGQIYKEKID
GEFRGGPAFY IEKGLGMKWY AWIFAVATIF ACGILLPGVQ ANSIGSALET AFDLSPAVTA
ALIALLLGFI IFGGVKRIAH FASAVVPFMA LGYIIVACVI IGMHIEQLPD VIILVVKSAF
GLEAGFGAIL GLAIMWGVKR GIYSNEAGQG TAPHASSAAA VSHPAKQGLV QAFSVYIDTL
FVCSATGFML LITGLYNVQG PEGEAIFTGI AGIAAGPGYV QTAMESMMPG FGNMFVAIAL
FFFAFTTIIA YYYIAETNIA YINRQVHRPW LTLLLKFALI AATVYGTVKT ADLAWGLGDI
GVGLMAWLNI VAILLLHNKA FACLKDYEAQ KAQGLDPVFD PEAMGIENAD FWVERKKQHQ
AIADEAAKAQ ASNTP
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