| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0610 |
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| Symbol | |
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| ID | 4017024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 696913 |
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| End bp | 697692 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637954595 |
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| Product | helix-turn-helix, AraC type |
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| Protein accession | YP_561623 |
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| Protein GI | 91791972 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC TTGCTTCAAT CGCTCCTTCC ATGGAATCGA CTCGGCCGTT ATTACAGCCC
ATCACTGTCG TTAATCGGCA GCTGCAAGCC CATTGCCATG TCATGTCCCA TAGCCATCTT
TGGGGCCAGT TCGTCTATGC CAGCCAAGGG GTGCTCGCAG TCAACACGCC CGCCGCCAGA
TATTTAGTCA CGCCGGAACA AGGGGTGTGG GTGAATTCCA ACATCAGCCA CAGCGTGACT
GCCATTACTG AGGTGAGGTT AACCAGTTTC TACCTTGACG AGTCCCAATG CCAAGCCTTG
CCCGAGCAAT CTTGCGTACT CAATGTGGCG CCGTTTTTAC ACGCCTTAAT ACAAGAAGCG
CGCCTTATAC CCAGCGACTT TGATTGGCAG GGCCCTCGAG GAAGGTTGCT AAGATTAATC
AGAGACTGGC TCAGTGAGGC GAAAAATGCC CCCTTTCATT TGCCCTATTC CAGCCACCCC
AAACTAATGC AGCTCTTTGG TGAACTGCAA AACAACCCCG CCAATCAGGA CAACATTGCC
ACTTGGGGCC AGCGTCTGGG GGCATCATCA CGCACCCTAT CCCGCTTAAT AAAGGCCGAA
ACAGGCTTAA GCTATCGCCA TTGGCGTCAA CGTCTCAATC TGCAATTGTC ATTAAGCTTG
CTTGCTCAAG GTCATAGCAT CAATCATATC GCCGACAGCC TAGGGTACGC TTCACCTTCG
GCCTTCATTC ACATGTTTAA GCAGCAAACC GGTGACTCAC CAGCCCGCTA TCGTAAATAA
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| Protein sequence | MPKLASIAPS MESTRPLLQP ITVVNRQLQA HCHVMSHSHL WGQFVYASQG VLAVNTPAAR
YLVTPEQGVW VNSNISHSVT AITEVRLTSF YLDESQCQAL PEQSCVLNVA PFLHALIQEA
RLIPSDFDWQ GPRGRLLRLI RDWLSEAKNA PFHLPYSSHP KLMQLFGELQ NNPANQDNIA
TWGQRLGASS RTLSRLIKAE TGLSYRHWRQ RLNLQLSLSL LAQGHSINHI ADSLGYASPS
AFIHMFKQQT GDSPARYRK
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