| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0601 |
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| Symbol | |
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| ID | 4017015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 687553 |
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| End bp | 688941 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637954586 |
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| Product | ATP-binding region, ATPase-like protein |
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| Protein accession | YP_561614 |
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| Protein GI | 91791963 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAG CCAGTATTTT GTCTAAGCGT GAAGCTTCAG CGGTGAAAAT GTTAAGCCGA
GGGCTAGGCT CAGCGGATCA ACTCGCCTTG CTCAGAGCCT TAGGTTGGTT GCTGCAACTA
TTACTGACCT TAGTGGGCGA GCAAGCCTTT GGCTTAAGCC TGCAATTAAC CCCGTTAACT
TGGGTGCTTG GCTTAGCGTT TGGCTATTTG CTGGTAACGC TTTGGTATCG CAAAGGGTTA
TTTTTACACG AGACAGGGCT GTTTTCAGTA TTACTGATAG ACACCTTATT GTGGACGGCT
TGGCTGTATT TTTCGGGCGG CGCCACTAAC GCTTTTATTT CATTGCTGCT ATTACCTATC
GCCCTGGCGG CTGTGACCTT GCCCTTGTGG GCGGCGTGGA GCCTGACGGC ATTATCGACC
TTAGCCTATA GTTTGATGAT TTTTTTTGTG CCAAGTTTTG ATACTGGAGG CGCGCCGAGC
ACAAGTGAAC ATGCCGCCAT GGGGCATGAG ATGATGGCAC ACATGGCCCA TGGCACCATG
GACATGGGCT CTCATTATGT AGGCATGTGG CTTAATTTTG TGGTGTCGGC ACTGGCATTA
ACCACCAGCG TCGCCTTGAT AGCAAGGCGG ATGCGCAAAC AAGATGCCGA GCTTGCCTAT
CACAGGGAAG CGCAGTTGAC TCAAGAGCAG CTGCTCGCTT TAGGCACTGC CTCGGCGCAG
ATGGCCCACC AATTAGCAAC GCCGCTTTCA AGCTTACGGC TATTGCTGGA TGAAGCTAAA
GAAAGCCCCC AAGCGCTGGC TTATCAAACT CAGACGGCTG AAGAAATGGA TCTTGCCCTT
GGGCGCTGTG AGCACACGCT TAAAGAATTA CGCTTAGCCA CAGAAAACAT ACGCTCTCAG
CATATGGCCA AGCAGAACTT GGCTGACTTA ATTAACGCCT TGCAGCACAG TTGTTTGCTG
TTTATGCCGC AGGCGAAAAT CAGCTGGCCT GATACTTTGT CCTCAGGGTT AGCTGCAATC
GAGCTCAATA CCGATCCCAG TGTGGTGCCG GCTTTGATGG CCCTCATAGA CAATGGCCTC
AGGGCGAGCA TGGACAATAT TCAACAGCCA AAAGTGAGCA TCACTGTGGC GTTACAGGCT
GCGGGGCAAG GCATAGGTTT GCGTATTCGC GACTTTGGCC AAGGCATAGC GCCGGCACTC
TTGGCGCAAC TGGGCAACCG CTTAGTGCAA AGCCCTAAGG GTTTGGGGGC CGCGTTATTA
CTTAGTCATG CAAGCATAGA GCGTTTGGGC GGGCAATTGA TTTTGGCTCA GCATCCACAG
GGCGGCACGG TCGCCGAAGT GCGTTTGCCC ACAGTAAATA GCGAAACAGG AACAAAAAGG
ACAGCATGA
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| Protein sequence | MKEASILSKR EASAVKMLSR GLGSADQLAL LRALGWLLQL LLTLVGEQAF GLSLQLTPLT
WVLGLAFGYL LVTLWYRKGL FLHETGLFSV LLIDTLLWTA WLYFSGGATN AFISLLLLPI
ALAAVTLPLW AAWSLTALST LAYSLMIFFV PSFDTGGAPS TSEHAAMGHE MMAHMAHGTM
DMGSHYVGMW LNFVVSALAL TTSVALIARR MRKQDAELAY HREAQLTQEQ LLALGTASAQ
MAHQLATPLS SLRLLLDEAK ESPQALAYQT QTAEEMDLAL GRCEHTLKEL RLATENIRSQ
HMAKQNLADL INALQHSCLL FMPQAKISWP DTLSSGLAAI ELNTDPSVVP ALMALIDNGL
RASMDNIQQP KVSITVALQA AGQGIGLRIR DFGQGIAPAL LAQLGNRLVQ SPKGLGAALL
LSHASIERLG GQLILAQHPQ GGTVAEVRLP TVNSETGTKR TA
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