Gene Sden_0600 details

Gene Information

• Locus tag: Sden_0600
• ID: 4017014
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 685061
• End bp: 687187
• Gene Length: 2127 bp
• Protein Length: 708 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637954585
• Product: hypothetical protein
• Protein accession: YP_561613
• Protein GI: 91791962

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCTG ACTTACCTTT GATCTTAGCC GGCCCTTTTC TGCGCCACTG TGATAATGAT 
AATTTCACCT TGTGCTGGGT AAGCCGTGAG CCTTTGACTG AGCTTAAGCT CACCCTGGCA 
GCCAAGCAGC ATTCATTAAC CTCTGAGCAT TTACAAGAAT TTGCCTTAGG CGATAAAGCG 
TTTTACTACT TGCTGCACCT AACGCAAACA GACTTGCTCC CGAGCAATCA AGGGATTAGC 
TATCATTTAA GCGCTAATGG TCATTCAGAC GTGTTCGCCT CTATTAGCGA GTTAACCTAT 
GCTGCCCAAA TCCCCCCCAC CACTGAGCCT GCCAACGCAG ATGGCACAGA AGTAGACGGC 
ACAGACACAG TCAACAAAGC GCAATCAACT AAAGCGTTAG CTAACTCGGC AAACGGGCCG 
GTATTTTATA TCAAGCCAGA CATAGTTGAC ATGCTTCATG GCTCTTGCCG TAACCCCCAC 
CATCACAGCG ATGATGCGCT AAAAGCTGCC GACACCCGCC TGAGTCAAGA CTTAAGCCTT 
GAAGCCAGAC CAAGCCTACT CATGTTAAGT GGCGATCAAG TCTATGTGGA TGATGTCTCA 
GGCCCCATGC TCTTTGCCAT AGGCCAAGTC ATCACCCTAC TGGGACTAAA ACAAGAGTGC 
TTCGAAGGAG CGAAAATAGC CGACAGTGAG GCGTTAGATT ACAACCCAGG CTCCATGTAT 
CAGCGCCATA ATAAGTTATT GCCGCACACT CAATATCCCG CTAAAACCGC CTTGTGGCGT 
TGGTATCGCA ACCACCCAAT TTTTACCTCC TCCATGGCGG AAAACCACTT ACTCAGTCTT 
GCTGAAGTCA TCGCCCTCTA CCTGCTGACC TGGTCGCCCA GCTTGTGGCA ATGTGTCGAT 
ATTCCGCAGC ATGCCACTGA GCTTAACAAG TTAGCTAGCC AGCGCTGGAA TAAGCAATAT 
CAGTACTTGA TGGTATTTGT AGAGGGACTC GGTCAAGTGA GGCGTTTACT GGCCCATCTG 
CCGACGTATA TGATGTTTGA CGATCATGAT GTGACCGATG ACTGGAACCT CACCGCCCGT 
TGGGAAGAGG CCGCCTATGG CCATGCCTTC TCCAAGCGCA TCATAGGCAA TGCCCTAATT 
GGCTACACCC TGTTTCAAGG CCTTGGCAAT AACCCAGACA AGTTCAAGCT TGAACTGCTG 
CCCTTGATAC ATAAGCTGTT TAGCCAAGCT AACACGCTGA CAATCAACAC TAACAGCCAT 
TCAATCGATG CAGCGTGCAC AGATCAGAAT GCTGCTGAGG TTGCGAGTGA GAATACCCCT 
GGTAAGACTG CAGTTAAGAC AGCAGGTGAG ACTGCTGCTG AGAAAGCAGA TGAGACAGTT 
GGGCCACAAG ATGTGCTTAT TCAAGCCTTG CTCAAATTTG AGCATTGGCA TTACAGCCTA 
GCCACCTCCC CTAAAGTCGT GGTGCTCGAT ACCCGCACCC GCCGTTGGCG CAGCGAATCC 
AACTTAGCCA AACCTTCAGG CTTGATGGAC TGGGAAGCCT TGATGGATTT ACAGCAAGAG 
CTTATCGACC AAGACAAGGT GATTATCGTC TCCCCCGCCC CCATCTTTGG GGTTAAGTTT 
ATTGAAGCGA TTCAGCGCAC AGCCACCTTA ATCGGCGGCT CGCTGTTAGT GGATGCGGAA 
AATTGGATGG CGCACCCTGG GGCCGCCAAT GCACTGCTGA GCATCTTTAT GCACCGCAAG 
ACACCGCAGC AATTTGTGAT CTTATCTGGG GATGTGCACT ACTCATTTAG CTACGATATT 
CGCATTCGCT TTCGCCACGG CAGCCCGCAT ATTTACCAAA TCACCTGCAG CGGCATTAAG 
AATCAGTTTC CCGAAAAGTT GTTACCCTGG TTTGATAAAC TCAATGGCTG GCTTTATGGT 
CATTTTTCAC CACTCAACTG GTTCACTAAG CGTAAACGCA TGCTCATTCG TGGCCGCCGC 
CCCAACGGCC ATAGCAGCCA GCGCCTCGTT AATCGCAGCG GTTTAGGCAT ATTAACCTTG 
GCCGAAAACG GCGCCCCCAA ACAGATAAGC GTGCTTCACA GCGATCTCAG TCAGACCATC 
TTCGAACCAC CAAGAAATGA GCGCTAA 

 

Protein sequence

MTADLPLILA GPFLRHCDND NFTLCWVSRE PLTELKLTLA AKQHSLTSEH LQEFALGDKA 
FYYLLHLTQT DLLPSNQGIS YHLSANGHSD VFASISELTY AAQIPPTTEP ANADGTEVDG 
TDTVNKAQST KALANSANGP VFYIKPDIVD MLHGSCRNPH HHSDDALKAA DTRLSQDLSL 
EARPSLLMLS GDQVYVDDVS GPMLFAIGQV ITLLGLKQEC FEGAKIADSE ALDYNPGSMY 
QRHNKLLPHT QYPAKTALWR WYRNHPIFTS SMAENHLLSL AEVIALYLLT WSPSLWQCVD 
IPQHATELNK LASQRWNKQY QYLMVFVEGL GQVRRLLAHL PTYMMFDDHD VTDDWNLTAR 
WEEAAYGHAF SKRIIGNALI GYTLFQGLGN NPDKFKLELL PLIHKLFSQA NTLTINTNSH 
SIDAACTDQN AAEVASENTP GKTAVKTAGE TAAEKADETV GPQDVLIQAL LKFEHWHYSL 
ATSPKVVVLD TRTRRWRSES NLAKPSGLMD WEALMDLQQE LIDQDKVIIV SPAPIFGVKF 
IEAIQRTATL IGGSLLVDAE NWMAHPGAAN ALLSIFMHRK TPQQFVILSG DVHYSFSYDI 
RIRFRHGSPH IYQITCSGIK NQFPEKLLPW FDKLNGWLYG HFSPLNWFTK RKRMLIRGRR 
PNGHSSQRLV NRSGLGILTL AENGAPKQIS VLHSDLSQTI FEPPRNER