| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0585 |
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| Symbol | |
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| ID | 4016615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 665099 |
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| End bp | 665878 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637954570 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_561598 |
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| Protein GI | 91791947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.170473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGT TAGCCTTAAA ACAACGTTTG AGTAGTGCAT CGCCGACCTT TGGAGTGTTT
AGCTCAATAG CCAGCTGCGT TGCATTCGAG CAACTCGCGC TTGCGGGTTA CGACTATGTG
ATTATCGACG TAGAACACAC GCTATTTAAT CCAGCGCAAC TGGACAGTCT ATTGCTGGCG
GCAAAAGCTT CGGGTATCAG TGCGTTAGTG CGCATCCCGA ATTCACGCTG GGATTGGATT
GCACCGCTGC TCGATGCGGG TGCCACAGGC ATTATCGCCG CTAATATTAA AACGGCAGCA
GAAGCAGAAG CTCTGGTGGC TGCCAGTTAT TATTATCCAC TGGGTAAAAG AGGCCTCAAC
AGCACCCGCT TTAACGGTTA CGCCAGCCAA GATTTGGCAG CGAGTAACAC AGCAGCAAAC
ACGAAAATCG TATTGATTGC TATGATAGAG AGCCGTGAAG GCCTCGCCAA TGCCAGTGCT
ATCACAGCTG TCACTGGTAT TGACGCCATT CTGGAAGGGG CAGCCGATCT TTCTCAAGAT
TTAGGTTTAC CTTGGCAAAC CCAACACCCC GACGTCAAAT CAGCACTACA AGATCTGCAA
ACCGTTTGTG CCCGTCAAAG TTGCGGCTAC ATAGCTTTGC CGCGACAACT GCCAGATATC
AGCCAGTGGC GTATGCGTGG CATCCATCAT TTTGTGCTGG GTGACGATCG CAGCATTATG
CGCCGTGCCC ATCAACAACA TCTCAATGCC TATTTACAGG AGTACCAACT CGGTGGTTAA
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| Protein sequence | MTPLALKQRL SSASPTFGVF SSIASCVAFE QLALAGYDYV IIDVEHTLFN PAQLDSLLLA
AKASGISALV RIPNSRWDWI APLLDAGATG IIAANIKTAA EAEALVAASY YYPLGKRGLN
STRFNGYASQ DLAASNTAAN TKIVLIAMIE SREGLANASA ITAVTGIDAI LEGAADLSQD
LGLPWQTQHP DVKSALQDLQ TVCARQSCGY IALPRQLPDI SQWRMRGIHH FVLGDDRSIM
RRAHQQHLNA YLQEYQLGG
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