| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0579 |
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| Symbol | |
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| ID | 4016609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 656391 |
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| End bp | 658016 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637954564 |
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| Product | peptidase M56, BlaR1 |
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| Protein accession | YP_561592 |
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| Protein GI | 91791941 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACAG AATTAACACT CTTTACCACT TTGGCTTTTC ATCACCTCAC CATAGGTGGG
CTATTAAGCC TTGGGTTATT ACTCACCCTT AAGTTGGTGC CATCAAGCGC CGAGCTAAGA
AGTTGGCTGT GGATGACGGT ATTTGTTCTG GTGACCTTAG TGCCTTTTTC TTTGTTGTCT
TTCAATGAGT CCGCGGCGGT AACAAACAGT GCATCTAGTC AAGGCGCCAG CCAGGTATTA
GCCATAAGTG GCACGCAAGT CATTGACGCA AGGCCCAATA CAGGTCCCAT CAAATTTCCC
TTGGCAGAGC AGGGCTGGCA CTTATCCAGC GCCGTGGTGT TTATGTTAAG CCCGCTATTG
CAAGGTTTCT TGGTCATCTG GCTGCTGGGC AGTGTGTGGC GCGGTTATCA TTTTTGTGTG
TCATTAGTGC GAACTTGGCG GCTCTTAGGG CGCAGTAAAA TGGGCCTTGC GGCTCACTTA
CAGGCAGAGA TTAACGATAA GCATATTGCG TTAGACACTC GCCTTAATGC CTTTGCCGTG
CCTAGGATTT CACTATGCCA AGGGGTGAGC TCGCCCTTGG TTACTGGCCT GTGGTCACCC
AAGATAATCA TCCCCTTAAG CTTAGCTCGG CAGCTGAGTG TGGAACAGCT CATCCCTATT
GTGCTGCATG AGCAGGCCCA TATTCAGCGA AAAGACATCT GGTGCGGTTT ATTTCAAGAA
GTTATCGCCA TTTTATTTTG GTGGAGCCCA GTAATTCGAT TTTTAAATAA GAAAATTCAT
ATAGATAGAG AGTTAGCCTG CGATATTCGT GCGGCCAAGC AACTGACGGG TAAGCAGTAT
GCTCAGTCAC TGCTGGACTG CGCTAAATTA ATGATACAAG AACAACGGAG TGTATTAACC
ATGGGATTAT TTAGCAAAAA GAAAGAGTTA GTCTACAGAG TCGATCAAGT GCTGCAAAAA
AATGCTTTCA CTCAAGTGAA TAAATTTTGG GTGACGGCGC TGTGTTTGGG CTTAAGCGTG
GGCAGTATTC AGGCGGCAAC GAGCTTATCA CCCAAAATAA TTGTTAGCGA AGCAAGAGCC
GATGGTAAGC AATATTCCTT GTTGCCCCAG ACTCAAGGGC AGCGCTTGGT GGATGCCGTG
TTGAATAACG ACATAGCGAC TATTAAGACG ATGCAAAATG CCGGTGTCGA TTTGGACATC
CCTGCCATTG GCGATGGCAC AGCCTTAATG GTGGCAGTGC AGAAGCATAA CCTAACTATG
GTGCAGGCCT TGCTCTCCCT TGGGGTCAAT GTAGATCAGC CCTCCATCGG GGATGGCAAT
CCGCTTATCG TGGCGGCCAT GGTGAATGAC CTTGAAATTG CCAAGGTGCT GCTGGATGCT
GGCGCTGACG TGAACGCCAT AGTGCATCAC GATGAGACAG CGCTTATCAA CGCGAGTTAT
CGCGGCTTTA TGGAAATGAC CCGTCTGCTG GTGGAGCGGG GCGCCGACGT TAACTTGGCC
GTCAAGACGG GTCCAGGGGA TGGCGGAGAA ATTCGCTCAC CGCTTAATCG CGCTCGAAAT
CAACAGATCA AAGATTATCT CATCAGCCAA GGCGCCAGCC AAGATGGTGT TCTGGCCAGG
CGTTAA
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| Protein sequence | MMTELTLFTT LAFHHLTIGG LLSLGLLLTL KLVPSSAELR SWLWMTVFVL VTLVPFSLLS
FNESAAVTNS ASSQGASQVL AISGTQVIDA RPNTGPIKFP LAEQGWHLSS AVVFMLSPLL
QGFLVIWLLG SVWRGYHFCV SLVRTWRLLG RSKMGLAAHL QAEINDKHIA LDTRLNAFAV
PRISLCQGVS SPLVTGLWSP KIIIPLSLAR QLSVEQLIPI VLHEQAHIQR KDIWCGLFQE
VIAILFWWSP VIRFLNKKIH IDRELACDIR AAKQLTGKQY AQSLLDCAKL MIQEQRSVLT
MGLFSKKKEL VYRVDQVLQK NAFTQVNKFW VTALCLGLSV GSIQAATSLS PKIIVSEARA
DGKQYSLLPQ TQGQRLVDAV LNNDIATIKT MQNAGVDLDI PAIGDGTALM VAVQKHNLTM
VQALLSLGVN VDQPSIGDGN PLIVAAMVND LEIAKVLLDA GADVNAIVHH DETALINASY
RGFMEMTRLL VERGADVNLA VKTGPGDGGE IRSPLNRARN QQIKDYLISQ GASQDGVLAR
R
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