Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0573 |
Symbol | |
ID | 4016546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 649527 |
End bp | 649808 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637954558 |
Product | TonB-like protein |
Protein accession | YP_561586 |
Protein GI | 91791935 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTACC TATTAACGAT TTTAACCATT GTTGTGTTTT TGAGTGGTTG CAACACTACT CCTTCTCAGC CTACTGAGGG CTATGTTCAG CTTCAGTTTG ATATTACTGA AGCAGGAGCA ACAGATAACA TAAAAGTAAT TAAGTCTGTT CCAAGTGGTT TCTTTGATGA AGAAGCAAAA AAATCGCTAT CAAAATGGAA GTACAAACCA AAGGTGGTAA ACGGCGTAAC TGTTCGACAA GTTGATCTTA AGGTGCAGCT AGATTTCACC CCCAAAAAAT AA
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Protein sequence | MKYLLTILTI VVFLSGCNTT PSQPTEGYVQ LQFDITEAGA TDNIKVIKSV PSGFFDEEAK KSLSKWKYKP KVVNGVTVRQ VDLKVQLDFT PKK
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