| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0530 |
|---|
| Symbol | |
|---|
| ID | 4016864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 598540 |
|---|
| End bp | 599286 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637954516 |
|---|
| Product | 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| Protein accession | YP_561545 |
|---|
| Protein GI | 91791894 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.219009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTTA TTGCCCGTTC AATCATCCTT TTTGTGTTGC TTTCTTTAGC ATTTGTTTTT
GCTATTGTTT ATTGTTTATT ACGTCCTCGT CATCGTGATA ATGTCCATGT ATTTGCCCAT
ATTTTTGGTG CGGTAGCCCC AGTGCTTGGC ATTAAGGTGA TCAATCGATG CGTCGATCCT
AACGTGGTTA AATCCCCATG CATTTATTTA TCGAATCATC AAAATAATTT CGATTTATTT
ACCCATACTT CAGCCGTGCC TAAGGGAACG GTGAGCTTAG GTAAGAAGAG CTTGGCTTGG
ATGCCGCTTT TCGGTCAGAT TTATTGGCTA TCGGGCAATA TTTTAATTGA TCGTAATAAT
CGCAATAGCG CCTTCGATAC TATGACGAAA ACCATAGAGA AAATGAAAAA AGATCTCTTG
TCTGTGTGGA TTTTTCCCGA AGGCACGCGT TCCCGTGGCC GTGGTTTGTT GCCGTTTAAA
GTCGGTGCTT TTCATACCGC CATCGCAGCT CAAGTACCTG TAGTGCCTGT ATTAGCTTCT
TGTCAGAACC ACATTAAACT AAATCGTTGG AACAATGGCG TGGTGATCGT TGAAATGATG
GCGCCTATTT CTACTCAAGG GTTAGGTAAA ACTGAGGCGA AAAGCTTCTG CGCTGAGGTG
CATGCCAAGA TGTCGACGCG ACTTGAGCAA TTGAATCAAG AAGCCAAGTT ATTAATGGCT
GATCCACAGG GCAAAGATAG CGTATAA
|
|---|
| Protein sequence | MLLIARSIIL FVLLSLAFVF AIVYCLLRPR HRDNVHVFAH IFGAVAPVLG IKVINRCVDP
NVVKSPCIYL SNHQNNFDLF THTSAVPKGT VSLGKKSLAW MPLFGQIYWL SGNILIDRNN
RNSAFDTMTK TIEKMKKDLL SVWIFPEGTR SRGRGLLPFK VGAFHTAIAA QVPVVPVLAS
CQNHIKLNRW NNGVVIVEMM APISTQGLGK TEAKSFCAEV HAKMSTRLEQ LNQEAKLLMA
DPQGKDSV
|
|---|
| |